Gene Svir_12020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12020 
Symbol 
ID8386539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1239936 
End bp1240133 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content60% 
IMG OID644975291 
Productprotein of unknown function (DUF397) 
Protein accessionYP_003133081 
Protein GI257055249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATAC AACGCTTGGA CGGAAATTGG CGGAAGTCTC GCTTCAGCAG CAACACGAAC 
TGTGTCGAGG CTCGTCGCGT CGAGGGTGGC GTGGAAGTTC GCAACAGCAA GCGGCCCGAT
GAGGCGACCA TCCGCTACAC CGACAGCGAG TGGAAGGCGT TCGTTGCTGG TGTGAAGGCG
GGCGAGTTCG ACATCTGA
 
Protein sequence
MTIQRLDGNW RKSRFSSNTN CVEARRVEGG VEVRNSKRPD EATIRYTDSE WKAFVAGVKA 
GEFDI