| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11910 |
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| Symbol | |
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| ID | 8386528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1232391 |
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| End bp | 1233203 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975280 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003133072 |
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| Protein GI | 257055240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.219754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGG GCCACACGCT GCATCGGTTG GCTCGGCTCC ACCGGCGGCG CTACGTGGGT
GCCCCGGTGG AGGTCTCGAG CCCTCAGGGG CGGTTCTCCA CCGAGGCCGC CGTGATCGAC
GGGCACGTCA TGACGGCGGC TGAGGCTTTC GGCAAGCACC TGTTCCACTA CTACGGTTCA
CAGGGCATCG TCCATGTCCA TCTCGGTCTG TACGGAACGT TCACCGAGTA CCCGCTGCCC
GTGGCCGAGC CCGTGGGACA GGTGCGGATG CGCCTGGTCG GCAGGACCCA CTGGACCGAT
CTGCGGGGTC CCAATCGTTG TGAGCTCTTG ACGCCTCCGC AGGCGGAGGC CCTGATCGCC
AGGCTCGGTC CCGACCCGTT GCGGGACGAC GCCGATCCCC AAGAGGCCTG GGAGCGGATC
TCGCGTTCCC GGGCCCCGTT GGCCGGGCTG CTGATGGACC AGTCGGTCAT CGCGGGCGTC
GGCAACGTCT ACCGAGCCGA AGTGCTCTAC CGACAGCGGA TCGACCCCAT GCTTCCGGGT
CGGTCGCTGA GCCGGCGGCG GTGGGATGCC CTATGGGCGG ATCTGCGTCA GCTGATGCGC
GAGGGCGTCC GACTGGGCCG TATCGACACC GTCGAACCCG AACACCGGCC CGAGGTGATG
GGCCGTGCCC CGCGGCGTGA CCGGCACGGC GGCGAGGTGT ACGTCTACCG CAGGACGCAC
AAGCCCTGCT TGGTGTGCGG TACGCCGGTG GCGCAGACGA AACTGGCAGG CCGGAACCTG
TACTGGTGTC CGACCTGCCA GCCCACCGAG TGA
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| Protein sequence | MPEGHTLHRL ARLHRRRYVG APVEVSSPQG RFSTEAAVID GHVMTAAEAF GKHLFHYYGS
QGIVHVHLGL YGTFTEYPLP VAEPVGQVRM RLVGRTHWTD LRGPNRCELL TPPQAEALIA
RLGPDPLRDD ADPQEAWERI SRSRAPLAGL LMDQSVIAGV GNVYRAEVLY RQRIDPMLPG
RSLSRRRWDA LWADLRQLMR EGVRLGRIDT VEPEHRPEVM GRAPRRDRHG GEVYVYRRTH
KPCLVCGTPV AQTKLAGRNL YWCPTCQPTE
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