| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11900 |
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| Symbol | |
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| ID | 8386527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1231918 |
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| End bp | 1232391 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975279 |
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| Product | ribose 5-phosphate isomerase |
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| Protein accession | YP_003133071 |
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| Protein GI | 257055239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.197382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGTGTGT ACCTGGGAAG TGACCATGCC GGTTACGAGT TGAAGAACCA TCTCGTCGCC
CATCTGCGCG AGCGGGGCTA CGAGGTGACC GACGTCGGCC CGCACGTCTA CGACGCCGCC
GACGACTACC CCGCTTTCTG CATCGAGACC GCTCGCAGGG TGGTGGCCGA CGAGGGCAGC
CTCGGCATCG TCATCGGTGG CTCGGGCAAC GGTGAGCAGA TCGCCGCCAA CAAGGTCCCC
GGCGCCCGTG CCGGACTGGC GTGGAGTGTC GAGACCGCCA GACTCACCCG TGAGCACAAC
CATGCCCAGC TGATCGGCGT GGGTGCGCGG ATGCATACGC TCGAGGAGGC CACGGAGATC
GTCGAGGCGT TTTTGACCAC CCCTCCGTCC GAGGACGCCC GACATGTGCG TCGAGTGGGC
CAGATCAGCG ACTACGAGCG CACCGGGACA CCTCCGGCGC TGCCGCAGAG CTGA
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| Protein sequence | MRVYLGSDHA GYELKNHLVA HLRERGYEVT DVGPHVYDAA DDYPAFCIET ARRVVADEGS
LGIVIGGSGN GEQIAANKVP GARAGLAWSV ETARLTREHN HAQLIGVGAR MHTLEEATEI
VEAFLTTPPS EDARHVRRVG QISDYERTGT PPALPQS
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