| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11870 |
|---|
| Symbol | |
|---|
| ID | 8386524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1227641 |
|---|
| End bp | 1230205 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975276 |
|---|
| Product | Membrane alanyl aminopeptidase |
|---|
| Protein accession | YP_003133068 |
|---|
| Protein GI | 257055236 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.504469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCTC CGAATCTGAC TCGCGAACAA GCCCAGCAGC GTGCTGGTCT GCTGAGTGTG
TCCACCTACG ACATCGAGCT GGATCTCACC GACGGCCGTG GAGGGCCGGG TGAGGGGACG
TTCGGGTCGA AGACGACCAT CCGGTTCTCC GCCAGGCGGC CGGGACAAAG CAGTTGGGTG
GACATCGTCG CCGAGGGCGT GCGGGAAGCC ACGTTGAACG GGCGGCATCT GGACGTGTCG
GCATACACCG AGGACGAGGG CATCGCGCTG CCGGATCTGG CCGCGGACAA CGAGCTCGTC
GTGCACGCTG ACTGCCGGTA CATGAACACC GGTGAGGGGC TGCACCGGTT CGTCGATCCG
GTGGACGGCG GTGTCTACCT CTACTCGCAG TTCGAGACGG CGGACGCCAA GCGCATGTTC
GCCTGTTTCG ACCAGCCTGA TCTGAAGGCC AGCTATCGGT TGACGGTGAC CGCGCCGAAG
GACTGGAAGG TCGTGTCGAA CTCTCCTGTG GCCTCGCGTG AGGACACACC GGAGGGTGCG
GTGCGCACGG TGTTCGAGCC CACCGAGCGC ATCTCCACCT ATTTGGTGGC GCTGGTCGCC
GGACCGTACG CCGAGTGGCG TGACACCTAT ACCGACGAGC ACAAGACGAT CCCGTTGGGG
ATCTATTGTC GGGCCTCGCT GGCCGAGCAC ATGGACGCCG AGCGGCTGTT CACCGAGACC
AAGCAAGGGC TCGGCTTCTT CCACGAGAAG TTCGGGGTGC CCTATCCGTT CGCCAAATAC
GACCAGTTGT TCGTGCCCGA GTTCAACGCC GGGGCGATGG AGAACGTGGG CGCGGTGACG
TTCTTGGAGG ACTACGTCTT CCGCAGCCGC GTGACCCGCT ACGCCTACGA ACGCAGGGCC
GAGACCTTGC TGCACGAGAT GGCGCACATG TGGTTCGGCA ACCTGGTGAC CATGCGTTGG
TGGGACGACC TGTGGCTGAA CGAGTCGTTC GCCACCTTCG CCGGGGTGTT GGCCCAGGCC
GAGGCCACCG AGTACACCGG GGCGTGGACC AGCTTCGCCA ACATCGAAAA ATCGTGGGCG
TACCGCCAGG ACCAATTGCC CTCGACCCAC CCGATCGCCG CCGACATGGT GGACCTGCAC
GCCGTGGAGG TGAACTTCGA CGGCATCACC TACGCCAAGG GCGCCAGCGT GCTCAAACAA
CTGGTCGCCT ACGTGGGCCT GGACAACTTC CTCGCCGGGC TGAAGGTCTA CTTCGACAAA
CACGCCTGGG ACAACGCCAC CCTGGCCGAC CTGCTGGCAG CCCTGGAGAA GGCATCGGGA
CGCGACCTGT CCTGGTGGAG CGCCCAATGG CTGGAGACCA CCGGGCTGAA CACGCTGCGC
CCCCGGTTCG AACTCGACGA CGAGGGACGG TACCGCTCGT TCGTCATCGA ACAGGAGGGG
GCCAAACCCG GCGCCGGTGA GCTGCGCACC CATCGCGTCG CCGTCGGCGT CTACGACGAC
GACGGAACAG GCGCGCTGGT GCGCACCCAC CGCGTGGAAC TCGACGTCGA CGGGGCACGC
ACCGACGTGC CCGATCTGGT CGGCGCCAAG GCGGGCTCTC TGGTCCTGGT CAACGACGAC
GACCTCACCT ACTGCGCCAT GCGACTGGAC AACCGGTCGA TGACGACCCT CATCGACCGC
ATCGCCGACA TCACCGAACC ACTCCCCCGC ACCCTGTGCT GGTCCGCAGC CTGGGAGATG
ACCCGCGACG CCGAGCTGAA GGCCCGCGAC TTCGTCACGC TGGTCCAACG TGGCATCCAC
GCCGAGACCG AGGTCGGGGT GGTGCAACGA CTGCTCGTGC AGGCACGGAC GGCGCTGGAC
TCCTACGCCG ATCCGGACTG GGCGGCCGAG CACGGCTGGC CCTCCTACAC CGCGAGGCTG
TTGGAACTGG CCCGTTCCGC GGAACCTGGC TCGGACCACC AGCTCGCGTT CGTCAACGCG
CTGACCAACT CGGTGCTCGA CGAGGCGATG CTGGATGTGC TGCGGGGCTG GTTGGACGGG
TCGGCTCCGC TGGAAGGCCT CACGGTGGAC ACCGACCTGC GGTGGCGCCT GCTGCACGCG
TTGGTGGCCC ACGGCCGCGC CTCCGACGCC GAGATCGACG CCGAGTTGGA ACGGGACGAC
ACGGCGACCG GGCGTAGGCA CGCAGAGCGG GCGCGGGCAC TGCGGCCCAC CCCGGAGTCG
AAGGCGGCGG CCTGGGAACG CGCGGTCTAC GACGACGAGT CCGCGAACGC GGTGAACGAA
GCCATCATCG CGGGCTTTTC CCACCCGGCG CAGAAGCATC TGCTGCGCGA CTACACACAG
CGGTACTTCG ACATGCTCGA CGAGATGTGG GGCCGCCGAT CCAGCGAACG TGCCCAACCG
ACCGTCATCG GGCTGTACCC GGCGTGGGAG GTGTCGGAGG AAGGCCTCGC GGCGGCCGAC
GCGTGGCTGG AGGGAGCGCA TCCGGCAGCG TTGCGTCGCT TGGTGTCCGA AGGCCGCGCC
GGCGTCGTGC GTGCGCTGGC GGCTCGGGAA TTCGACGGAA GCTGA
|
|---|
| Protein sequence | MPAPNLTREQ AQQRAGLLSV STYDIELDLT DGRGGPGEGT FGSKTTIRFS ARRPGQSSWV
DIVAEGVREA TLNGRHLDVS AYTEDEGIAL PDLAADNELV VHADCRYMNT GEGLHRFVDP
VDGGVYLYSQ FETADAKRMF ACFDQPDLKA SYRLTVTAPK DWKVVSNSPV ASREDTPEGA
VRTVFEPTER ISTYLVALVA GPYAEWRDTY TDEHKTIPLG IYCRASLAEH MDAERLFTET
KQGLGFFHEK FGVPYPFAKY DQLFVPEFNA GAMENVGAVT FLEDYVFRSR VTRYAYERRA
ETLLHEMAHM WFGNLVTMRW WDDLWLNESF ATFAGVLAQA EATEYTGAWT SFANIEKSWA
YRQDQLPSTH PIAADMVDLH AVEVNFDGIT YAKGASVLKQ LVAYVGLDNF LAGLKVYFDK
HAWDNATLAD LLAALEKASG RDLSWWSAQW LETTGLNTLR PRFELDDEGR YRSFVIEQEG
AKPGAGELRT HRVAVGVYDD DGTGALVRTH RVELDVDGAR TDVPDLVGAK AGSLVLVNDD
DLTYCAMRLD NRSMTTLIDR IADITEPLPR TLCWSAAWEM TRDAELKARD FVTLVQRGIH
AETEVGVVQR LLVQARTALD SYADPDWAAE HGWPSYTARL LELARSAEPG SDHQLAFVNA
LTNSVLDEAM LDVLRGWLDG SAPLEGLTVD TDLRWRLLHA LVAHGRASDA EIDAELERDD
TATGRRHAER ARALRPTPES KAAAWERAVY DDESANAVNE AIIAGFSHPA QKHLLRDYTQ
RYFDMLDEMW GRRSSERAQP TVIGLYPAWE VSEEGLAAAD AWLEGAHPAA LRRLVSEGRA
GVVRALAARE FDGS
|
|---|
| |