Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11820 |
Symbol | |
ID | 8386519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1223791 |
End bp | 1224801 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644975271 |
Product | small-conductance mechanosensitive channel |
Protein accession | YP_003133063 |
Protein GI | 257055231 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.139296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACAGT TCCTCAGCGA ACCCTCCGGG AGCGAACCAC CCGAATGCGC CCAGGACATC GGATCGTGGT GTCAACAGGT CTGGGAGATC ACGGGTAACC CGTGGCTTGC GGCGTCGGCC GACTGGCTCA TAGCACGGCC GCTCCGAATC CTGCTGATCC TCCTCGGCGC GATCCTCATC CGATTCTTCG TCCGGAAACT GATCGACCGA CTCACCCGGA CGTCGGCCGA GGGCGCGGCC AAGGTACCCG CGATACTACG GCCCTTGAAG GAACGGGCCC CCGAAGTCCT CGGTCCCGTG GTGCTGGAGC GGCGTCGGCA ACGAGCCCAG ACCATAGGTT CGTTGCTGAA GTCGCTGACC AGTTTCGTGG TGTTCGGCTT GGCGTTCGTG CTGATCCTCG GCGAACTGGG CATCAACCTC GCTCCCATCC TCGCCTCCGC CGGTATCGTC GGCGTGGCCG TCGGTTTCGG CGCGCAGAAC CTCGTCAGGG ACTTCCTGTC GGGCATCTTC ATGATGCTGG AGGACCAGTA CGGCGTCGGT GACATCGTGG ACGTCGGTGA GGCCACCGGC ACGGTGGAGT CGGTGGGACT GCGCATCACC ACACTCCGCG ACCTCAACGG CACTGTCTGG TATGTCCGAA ACGGCGAGGT ACTGCGTGTC GGCAACTTCA GCCAGGGTTA CGCGGTGGCC GTCGTCGACA TCCCCGTCGG CTACCACAGC GGCATCGACA AGGCCACGGC CGTGCTGGAA CACGTGGCGA AGAAGGCGGC CGAACTAGAC TCGATCGCAC CCGACGTTCT GGAGGCCCCG CAGGTCTTAG GCGTTGAGAA CGTCACTCCG GAAGCCGTCC AACTCCGTCT CACCACCAAG GTGCGGCCCG GCCGCCAGTG GGCCGTGCAA CGCGCTCTTC GAGCCGAGAT CATGCGGGCA CTGGAGCGCG AGGGCTTCGA ACCGCCGCTC GGCCTGTTCC TGGGGGCCCG TGGCCGAAAC GGTGAGCCGG CCGACAGCTG A
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Protein sequence | MEQFLSEPSG SEPPECAQDI GSWCQQVWEI TGNPWLAASA DWLIARPLRI LLILLGAILI RFFVRKLIDR LTRTSAEGAA KVPAILRPLK ERAPEVLGPV VLERRRQRAQ TIGSLLKSLT SFVVFGLAFV LILGELGINL APILASAGIV GVAVGFGAQN LVRDFLSGIF MMLEDQYGVG DIVDVGEATG TVESVGLRIT TLRDLNGTVW YVRNGEVLRV GNFSQGYAVA VVDIPVGYHS GIDKATAVLE HVAKKAAELD SIAPDVLEAP QVLGVENVTP EAVQLRLTTK VRPGRQWAVQ RALRAEIMRA LEREGFEPPL GLFLGARGRN GEPADS
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