| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11780 |
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| Symbol | |
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| ID | 8386515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1217257 |
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| End bp | 1222188 |
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| Gene Length | 4932 bp |
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| Protein Length | 1643 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975267 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_003133059 |
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| Protein GI | 257055227 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.313552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACCG ATACCGCCGA GACGCCAAGA AGCCCGGAGC AGCTCCGCGA CGAACTCGTG
GAGACCACCG CGGCCCAGGC GCCGGACATC GCGGATCTCA TCCGCATGTA CTACCGGCTC
GTTCCCGCCG AGGAACTCCT CGGCGACAGC CCTACGGACT TGATCGGTGC GGTCAGGTCA
CACGTGGAGC TCGCTCGGAA GCGGGTACCG GGCAGGTCGG TGGTCCGACT GTTCAACCCG
AACATTGAGC ACGACGGTTG GGCGCGCGAG TCCACGGTCG TCCAGGTGGT CACGGACGAC
ATGCCGTATC TGGTGGACTC CGTGGTCGCC GAACTGGCGC GCAGTGGTGT TCAGGTGCAG
CGCATCGTGC ACCCCATCGT GGTCGTGAAC AGGGATGTGA CGGGCGCTTT GGAGGAGATC
TACCCCAAGG CCAACGTCGC GACCCCACCG TCCGGTGCCG TCGTCGAGTC GTGGATGTAC
CTGGAGGTCG ATCCGATCGG CGACCCGGAG CGCGCCCGGG AACTGGACAA CAGGTTGGTC
AGGGTGCTCA ACGACGTCCG AGAGGTCGTC GAGGACACCG ACAAGATGAC GCGGGCGGCG
ACGGACATCG CCACAGCGCT CGAGGAACAG CCACTGCCGT TGCCCGAGGA GGAGGTGTCC
GAGGGTGTGG AGTGGTTGCG ATGGCTGGCC AACGGGCACT TCATGTTCCT GGGATACCGC
CACTACGAGG TGGTGCCCGA GTCGCAGGGC AGCGACGAAC CCGTGCTGCG GCCCGTTCTG
GCCTCCGGCC TGGGGGTGCT TCGTCAGGAC AGTTTCGCCG CCCGTGACCT CATCGACGGC
CCCGACACCG CTTCGCGCGT GCTGACGCCG ACGTTGTTGG TGTTGACCCA AGCCAGTGCC
CAGTCCACAG TGCATCGGCC CGTCTACCCG TACTACGTCG GGGTCAAGAC GTTCGACGAC
GAAGGCCGGG TGACGGGTGA GCATCGCTTC CTCGGCATGT TCACGTCGTC GGCTCTGCAC
GAGGACGTGC TCGACATCCC CGTGGCCAAT CGGCGTGTCC GCGAGGTCAT CCATCGGGCC
GGATTCCCGA TGGAGTCGTA CTCGGGCCAG CAGATGCTGG AGGTCCTGCA GAACTGGCCG
TTGGCCGATC TGCTGTCGGC CGACATCGAT TCGCTCTACT CCACCGCTAC GGGGGCGATC
ACACTCACCG GGCGGCGCAG GTTGCGGTTG TTCCTCCGTA AGGACCCGTA CGGGCGTTTC
TACTCGTGCC TGGTGCTCCT GCCCCGCGAC CGCTACACGA CGCGTTCGCG ACTGGCCATG
CAGCGGGTCC TGCTCGACGA ACTCGACGGC ACGTCGTTGG AGTACAGCAC CCGGTTCAGC
CAGATCTCGT TGGCGCAGGT CCATTTCACC GTCTACACCA GACCGGAGGA GATCTCCGAG
CCCGACACCG TGCGTATCCA GGAGCGCCTC GAGGAGGCCG CGCGGACCTG GGACGACGCA
CTGGTGGAGG CGATCCTCGC CGAGCGCAGG GTCCGTGCCG GCGGTGGCAA GGCGGTGACG
CTGGCGGGGG AGGAGTCGGC GAGCGAGCAG GCGCACCGGT ACGCGTCGGC GTTCTCCGAG
GCGTACAAGG AGGACTTCGA CGCGGAGACG GCGCTGGCCG ACATGCGGAA GCTGGAGGCG
TTGAACACGC CCGACGCGCT CGACATGTCG TTCTACCTGC CTGCCGGTGC GGCGGCGGGG
GAGCGACGGT TCAAACTGTA CCTGCGCGAG GCCGTCACAC TGTCCACATT GTTGCCGATG
CTGCAGCACA TGGGTGTGGA GGTGGTGAAC CAGCGGCCGT ACGAGGTGCA GACCGAGGAC
GGCCACCAGT GCTGGATCTA CGACTTCGGC CTGCGGATCG AGCCGCGTGT GCTGGCGGAT
TCCGGTGACG ATGCCGAAGA GGACCTCCGC GTGCGGTTCC AGGACGCGTT CGCCGCGGCG
TGGAGGGGAC TCGCCGAGGT CGACGGGTTC AACGCGCTCG TGCTGCAGGC GGGACTGACC
TGGCGGCAGG TCGCGGTGCT GCGCGCCTAT TCGCGGTACC TGCGGCAGGC CGTCTCCCCG
TACTCGCAGG AGTACATCGA GGCCGCGCTG CTCGCACACA CCGACGTCGC GAAGGCGCTG
GTGCGGTTGT TCGAGTTGCG GTTCGACCCC GCACGGAGCG ACGACCGGCG CGCCGAGGAG
GTCGAGGCCC AGGTCGCCGA GATCAACGCC ATGATCGACA CGGTGACGAG CCTGGACACC
GACCGCATCC TGCGCCGGCT GCTCTCGGTG ATCATGGCGA CGTTGCGCAC CAACTACTGG
GTGACCGACG CGGACGGTTC ACCGCGTTCG TACCTCTCCT TCAAGCTCGA CCCGCAGCAG
GTGCCGGAGC TGCCGGAACC GCGTCCCGCC TACGAGATCT TCGTGTGTTC GCCCCGGGTC
GAGGGTGTGC ACCTGCGGTA CGGTTCCGTG GCCCGAGGCG GGTTGCGGTG GTCGGACCGT
CGCGAGGACT TCCGTACCGA GGTCTTGGGA CTGGTCAAGG CGCAGGCGGT GAAGAACTCC
GTCATCGTGC CGGTGGGTGC CAAGGGCGGT TTCGTGGTCA AGCAGCCGCC CACGCCGACC
GGTGACCCGA GCATCGACAG GGAGAACCAC CAGCGCGAGG GCATCGAGTG CTACCGCATG
TTCATCTCGG GGATGCTCGA CCTCACCGAC AACCTCGTCG AGGGCGAGAC CGTGCCCGCG
CGGGACGTGG TGCGCTACGA CGGTGACGAC AGCTATCTCG TCGTGGCCGC CGACAAGGGC
ACCGCGTCGT TCTCGGACAT CGCCAACGAG GTCGCGGCCG AATACGGCTT CTGGCTCGGT
GACGCCTTCG CCTCCGGGGG CTCCCACGGC TACGACCACA AGGCCATGGG CATCACGGCG
AGGGGCGCCT GGGAGAGCGT CAAACGGCAC TTCCGGGAGC TCGGCAAGGA CACCCAGAGC
GAGGATTTCA CGGTCGTCGG CATCGGGGAC ATGGGTGGGG ACGTCTTCGG CAACGGAATG
CTGTTGTCGA AGCACATCCG ACTGGTGGCC GCGTTCAACC ACCTGCACAT CTTCCTCGAC
CCGAACCCCG ACGCGGCGAC GTCGTACCGC GAGCGCAAGC GGCTGTTCGA GCTGCCGCGT
TCGTCCTGGG AGGACTACGA CCGTTCGCTC ATCAGCGAAG GTGGTGGCGT CTACTCGCGG
TCGGCGAAGA CGATCCCGGT GAGCCCGCAG GTGCGACAGG CGCTCGGTCT GCCCGACGAC
GTGACGACGA TGTCCCCGGC GGAACTCATC CGCGCCATTT TGAAGGCACC GGTGGATCTG
CTGTGGAACG GCGGCATCGG CACCTACGTG AAGGCGGAGA GCGAGACGCA CGCCGACGTG
GGCGACAAGG CCAACGACGC CGTGCGCGTC AACGGCAACG AGCTTCGCGT GAAGGTCGTG
GGCGAGGGCG GGAACCTCGG CTTCACCCAG CGCGGCCGCA TCGAGTTCGC CCGGAAGGGC
GGCAAGATCA ACACCGATGC CCTCGACAAC TCGGCCGGTG TGGACAGCTC GGACCTCGAG
GTGAACATCA AGATCCTCCT CGCCCAGCTC GTGGCGAAGG GGGAGCTCGA CGAGCAGCGG
CGCAACACCC TGCTCGCGGA GATGACCGAC GAGGTCGCCG AACTGGTGTT GGCCCACAAC
TACCGGCAGA ACGCCGTTCT CGGTGTCAGC CGCGCACACG CGGCGTCCAT GCTGTCCGTG
CACAGCAGGC TCGTGGCCTC CCTGGAGGCC AAGGGCGCGC TCGACCGGGA GCTGGAGGCG
CTGCCCAGCG AGGCGGAGTT CGCGGCTCGG GAGAAGGCCG GTGAGGGGTT GAGCTCGCCC
GAACTGGCGA CCTTGCTGGC ACACGTCAAG CTCGACCTCA AAGACGAGCT CCTCGCCAGC
GACCTGCCGG ACGAGGAGGT CTTCGCTCGC CGGCTGCCGG AGTACTTCCC GACGCCGTTG
CGTCGTGATT TCGCGGACGA GATCGCGAAG CACGCACTGA GCCGGGAGAT CACCACGACC
CTGCTGGTGA ACGAGGTCGT GGACGGTGCG GGCGTGTCGT ACGCGTTCCG GCTCGCGGAG
GAACTCAACG TCACCGCCAC TGACGCCGTG CGGGCGTTCG CCGTGGTCAC CGGCGTCTTC
GAGCTGCACA AGGTGTGGGC CGACATCGCC GCGCTCGACA ACGTGGTGCC CACCGCTGTC
GCCGACGCGA TGGTGCTGGA GACGAGGCGA CTGCTCGATC GTGCGGCCAG GTGGTTCCTC
ACCAACCGGC CGCAGCCGTT GGCCGTCGCC GACGAGATCG ACCGGTTCGC CGAACGCATC
GCCGCACTGG TGCCGCAGTT GGACGGTCTG CTGCGGGGCG AGGAAGCCGA GGCCACGCGA
CGGAAGACGG CGGAGCTGGT CGACCAAGGA GTGCCGGAGG AACTCGCCCG GCGGGTGTCG
CTGGCGATCA CGAGCTTCTC CCTGCTCGAC ATCGTCGAGG TCGCGGAGGT GGCCGAGCGG
GAGATCGGGC TGCCGGCGGA GCGCGGACTC ACTGAGACCG CCGAGCTGTA CTACGCGCTG
TCCGACCACC TGGGCATGGA CCGCATGTTG ACGTCCGTGA ACACGCTGGA GCGGGGTAAC
CGGTGGCACT CACTCGCCCG GTTGGCGTTG CGGGACGACC TGTATTCGTC GATGCGGTTG
ATCACCCTGG AGGCCCTGCG GCAAAGCAAC CCCGACGACA GTGTGGACGC CAGGATCGAG
CAGTGGGAGC AGGCGAACTC GCCGCGACTG GAGCGCGCTC GCGCGACCTT GGACGAGATC
GAGAGCTCCG GTGTGTTCGA TCTGGCGACG TTGTCGGTGG CGGTGCGGCA GATCCGTGGC
GCGGTCCGGT GA
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| Protein sequence | MNTDTAETPR SPEQLRDELV ETTAAQAPDI ADLIRMYYRL VPAEELLGDS PTDLIGAVRS
HVELARKRVP GRSVVRLFNP NIEHDGWARE STVVQVVTDD MPYLVDSVVA ELARSGVQVQ
RIVHPIVVVN RDVTGALEEI YPKANVATPP SGAVVESWMY LEVDPIGDPE RARELDNRLV
RVLNDVREVV EDTDKMTRAA TDIATALEEQ PLPLPEEEVS EGVEWLRWLA NGHFMFLGYR
HYEVVPESQG SDEPVLRPVL ASGLGVLRQD SFAARDLIDG PDTASRVLTP TLLVLTQASA
QSTVHRPVYP YYVGVKTFDD EGRVTGEHRF LGMFTSSALH EDVLDIPVAN RRVREVIHRA
GFPMESYSGQ QMLEVLQNWP LADLLSADID SLYSTATGAI TLTGRRRLRL FLRKDPYGRF
YSCLVLLPRD RYTTRSRLAM QRVLLDELDG TSLEYSTRFS QISLAQVHFT VYTRPEEISE
PDTVRIQERL EEAARTWDDA LVEAILAERR VRAGGGKAVT LAGEESASEQ AHRYASAFSE
AYKEDFDAET ALADMRKLEA LNTPDALDMS FYLPAGAAAG ERRFKLYLRE AVTLSTLLPM
LQHMGVEVVN QRPYEVQTED GHQCWIYDFG LRIEPRVLAD SGDDAEEDLR VRFQDAFAAA
WRGLAEVDGF NALVLQAGLT WRQVAVLRAY SRYLRQAVSP YSQEYIEAAL LAHTDVAKAL
VRLFELRFDP ARSDDRRAEE VEAQVAEINA MIDTVTSLDT DRILRRLLSV IMATLRTNYW
VTDADGSPRS YLSFKLDPQQ VPELPEPRPA YEIFVCSPRV EGVHLRYGSV ARGGLRWSDR
REDFRTEVLG LVKAQAVKNS VIVPVGAKGG FVVKQPPTPT GDPSIDRENH QREGIECYRM
FISGMLDLTD NLVEGETVPA RDVVRYDGDD SYLVVAADKG TASFSDIANE VAAEYGFWLG
DAFASGGSHG YDHKAMGITA RGAWESVKRH FRELGKDTQS EDFTVVGIGD MGGDVFGNGM
LLSKHIRLVA AFNHLHIFLD PNPDAATSYR ERKRLFELPR SSWEDYDRSL ISEGGGVYSR
SAKTIPVSPQ VRQALGLPDD VTTMSPAELI RAILKAPVDL LWNGGIGTYV KAESETHADV
GDKANDAVRV NGNELRVKVV GEGGNLGFTQ RGRIEFARKG GKINTDALDN SAGVDSSDLE
VNIKILLAQL VAKGELDEQR RNTLLAEMTD EVAELVLAHN YRQNAVLGVS RAHAASMLSV
HSRLVASLEA KGALDRELEA LPSEAEFAAR EKAGEGLSSP ELATLLAHVK LDLKDELLAS
DLPDEEVFAR RLPEYFPTPL RRDFADEIAK HALSREITTT LLVNEVVDGA GVSYAFRLAE
ELNVTATDAV RAFAVVTGVF ELHKVWADIA ALDNVVPTAV ADAMVLETRR LLDRAARWFL
TNRPQPLAVA DEIDRFAERI AALVPQLDGL LRGEEAEATR RKTAELVDQG VPEELARRVS
LAITSFSLLD IVEVAEVAER EIGLPAERGL TETAELYYAL SDHLGMDRML TSVNTLERGN
RWHSLARLAL RDDLYSSMRL ITLEALRQSN PDDSVDARIE QWEQANSPRL ERARATLDEI
ESSGVFDLAT LSVAVRQIRG AVR
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