Gene Svir_11330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11330 
Symbol 
ID8386470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1171232 
End bp1172443 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID644975223 
Productglycosyltransferase 
Protein accessionYP_003133016 
Protein GI257055184 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.902273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCT CGATGGTGTC CGAGCACGCC AGCCCGTTGG CGGCGCTGGG CGAGGTCGAT 
GCGGGCGGCC AGAACGTGCA CGTGGCCGAG CTGTCCGCGG GGCTGGCCAG GGCGGGGCAC
GAGGTGACCG TCTACACCCG GCGCGACGAT CCCGACCAAC CCGACGAACT CACCATGCCC
GGCGGCTATC GAGTGATACA CGTACCCGCC GGTCCTCCAC GCCACGTGCC GAAGGACGAA
TTGCTGCCGT TCATGGGCGA GTTCACCCGC TTCCTGCGCG AACGATGGGA GCTCGACCGC
CCGGACGTGG TGCACGCGCA CTTTTGGATG TCCGGCTTGG CCTCGTTGAT GGCGGCGCGC
CCGGCCGGGA TCCCGGTGGT ACAGACGTTC CACGCCCTCG GGGTGGTGAA GCGTCGTTAC
CAGGGGGCCC ACGACACGAG TCCCTCCGAG CGGATCGGCC TGGAACGCCT CATCGGACGA
CACGCGGCCC GCATCGCGGC CACCTGCTCG GACGAGGTCT TCGAACTCGT CCGGATGGGA
CTTCCGCGTT CCCGGATGTC GGTGGTGCCC TGCGGGGTCG ATCTGACGAT GTTCACGCCG
TCGGGTCCCA AACAGCCGCG GGGCAACCGG TACCGCATCG TCTCGGTCGG CAGATTGGTC
CCCCGTAAGG GTTTCGACGT CGCCATCGCG GCGCTGCGGT CCCTGCCGGA GACGGAACTG
GTCATCGTGG GCGGCCCCAG GGAGGGCGAA CTCGCCGAGG ACCCGGAGGC CCGGCGGCTC
CTGCGGTTCG CGGCCGAACT CGGGGTGGAC GACCGGGTGC GGCTGACGGG GCGGATCACG
CGGACGGACA TGCCGTCCCT GCTGCGCTCC GCCGATGTCG TGGTGTGCAC TCCGTGGTAC
GAGCCGTTCG GGATCGTGCC GCTGGAGGCG ATGGCCTGCG GCATCCCCGT CGTGGCGTCC
GCGGTCGGAG GACTGACCGA CACGATCGTG GACGGGGTGA CGGGCACGCA CGTACCGCCA
CGGCGTGCCG ACGCCGTGGC CGCGGCCGTA CGCCGACTGC TGTCCGACGC CGCTTTGCGC
GACGCCTACG GCATCGCGGG CGCCGACCGG GCCCGCTGTC GGTACTCATG GGACCGCATC
GCCGCCGACG CCTCCCGCGT CTACGAACGC GCGGTCCCGA CGGCTGTCGT CAGCGGCGAG
GAAACGGGCT GA
 
Protein sequence
MKISMVSEHA SPLAALGEVD AGGQNVHVAE LSAGLARAGH EVTVYTRRDD PDQPDELTMP 
GGYRVIHVPA GPPRHVPKDE LLPFMGEFTR FLRERWELDR PDVVHAHFWM SGLASLMAAR
PAGIPVVQTF HALGVVKRRY QGAHDTSPSE RIGLERLIGR HAARIAATCS DEVFELVRMG
LPRSRMSVVP CGVDLTMFTP SGPKQPRGNR YRIVSVGRLV PRKGFDVAIA ALRSLPETEL
VIVGGPREGE LAEDPEARRL LRFAAELGVD DRVRLTGRIT RTDMPSLLRS ADVVVCTPWY
EPFGIVPLEA MACGIPVVAS AVGGLTDTIV DGVTGTHVPP RRADAVAAAV RRLLSDAALR
DAYGIAGADR ARCRYSWDRI AADASRVYER AVPTAVVSGE ETG