| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11290 |
|---|
| Symbol | |
|---|
| ID | 8386466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1165956 |
|---|
| End bp | 1166825 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975219 |
|---|
| Product | Polysaccharide pyruvyl transferase |
|---|
| Protein accession | YP_003133012 |
|---|
| Protein GI | 257055180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.552511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.137715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGC TGGTGACCGG ATGGCCGAGT TTCCTCCATG GGGAGGCGAC CGCCGGTGAC
GTGTTGAGCA TGCGCCGCGT CAGCGACGCG CTCGACAGCG CCGGGATCGC CGTGGACATC
GCATGGAGTC CGGTGCTGTA TCCCGATGCG CTCCATCTCG ACAGCGCCGA CCCGGCGCAC
TACACCCATG TGGTCTTCAC GTGCGGGCCC GTGTACGGCG AGCAGGTGGA GTGGCTGCAT
CGGCGTTACG CCGCCTGTCG TCGGATCGCG GTCGGCGTGT CGGTACTCGA TCCGCACAAC
GCCGCAGCCG CGGGATTCCA CCGCATCCTC GCCCGGGACG GGTTGGGCGA ACCGCAACCC
GATCTGTCGT ACGGCGCGCA CACCGACTCG GTCCCGGTCG CCGCGATCAT GCTCGCGCCC
GGACAACACG AGTACGGCGG TCGCCGCAGA CACGAGCAGG TGCACAAGAC CCTGCTGAAC
TGGATCACGG ACGTCGACTG CGCCCGGGTC GGACTGGACA CCCGGCTCGA CTCGGCGGAT
TGGCGACACT GTGCCTCGCC CGACCAGTTC TCCTCCCTGG TGGCTCGCTT CGACATCGTG
GTGACCACCC GCATGCACGG ACTGGTGCTT GCCTTACGGG CCGGGGTGCC CGCGTTGGCG
GTGGACCCGG TCGCGGGAGG CGGCAAGGTG ACGGCACAGG CGCGGGCTTT GGGGTGGCCC
GCCGTGATCC CCGCAGAGGA GGTCTGTCCG GAAACACTCG ACCGCTGGTG GAGTTGGTGC
CTACCCGAGC CGTCCCGGCA GTGCGTGCGG ACGTCCTCGG GAGGTCGGGG AACGCTCGTC
GCCGAGCTTG TGGGTGAGGT GTTGCGATGA
|
|---|
| Protein sequence | MRVLVTGWPS FLHGEATAGD VLSMRRVSDA LDSAGIAVDI AWSPVLYPDA LHLDSADPAH
YTHVVFTCGP VYGEQVEWLH RRYAACRRIA VGVSVLDPHN AAAAGFHRIL ARDGLGEPQP
DLSYGAHTDS VPVAAIMLAP GQHEYGGRRR HEQVHKTLLN WITDVDCARV GLDTRLDSAD
WRHCASPDQF SSLVARFDIV VTTRMHGLVL ALRAGVPALA VDPVAGGGKV TAQARALGWP
AVIPAEEVCP ETLDRWWSWC LPEPSRQCVR TSSGGRGTLV AELVGEVLR
|
|---|
| |