| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11280 |
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| Symbol | |
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| ID | 8386465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1164904 |
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| End bp | 1165893 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975218 |
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| Product | nucleoside-diphosphate-sugar epimerase |
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| Protein accession | YP_003133011 |
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| Protein GI | 257055179 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.883785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.146231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCTC GGGGTGAACG CGAACACGTA TTGGTGGTCG GCGGCGCGGG ATTCATCGGA
TCCCATGTCT GCCAACGTCT TCTGCGTTCC GGACACCGAG TGACCTGTGT GGACAGTCTG
GTGACCGGGA GCGTCACCAA CGTGGCATCC CTGCTGGACG ACGCACGATT CCGATTCGTC
GAACTCGACG TCACCCTTCC GCTTCCACGA TGGCCCGATC TGGGAACACC CGATTCCGTG
CTGAACCTGG CCTCGCCCGC CTCACCGAAG GACTACCAAC GGCTGCCGAT CGAGACCCTG
CGCACGGGCT CGCGGGGGAC GGAGCACACA TTGGAACTGG CCGTCCGGCA CGGGGCGCGA
TTCGTGTTGA CGTCGACGAG CGAGGTGTAC GGCGATCCGC TGGAACATCC GCAACGGGAG
ACGTACTGGG GCAACGTCAA CCCGATCGGA CCACGCAGCG TGTACGACGA GGCCAAGCGT
TACGCCGAAG CACTCACCAT GGCCTACCAC CGGGAACTCG GCGCGGACGT GGCCATCGCG
CGCGTGTTCA ACACCTACGG TCCGCGCATG CGCACCGACG ACGGGCGCAT GATCCCGAAC
TTCATCACCC AGGCGCTGTC GGGGGCACCG CTCACCGTGG CGGGTTCCGG GACGCAGACC
CGTTCGGTGT GCTACGTCGA CGACACGGTG ACCGGGCTGC TCGCGTTGTG GCGCAGTGGG
CTCACCGGAC CCGTGAACAT CGGCAACCCC CACGAGCTGA CGGTGGGACA GGTGGCCGAG
GAGATCCGGA GGATCACGCG GACGACCTCG CCGGTGATCT CGATCCCCGG TGCGGTCGAC
GACCCTCGAC GGCGTTGCCC CGACATCACC GTCGCCCGCA CCCAGCTGGG CTGGAGCCCC
GAGGTCGGTC TCCACGAAGG ACTGCGACGC ACCATCGCCT GGTTCGCCGC GTCCACCGAG
CCGGTGTCGC ACACGTCCCG GACTTCGTAG
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| Protein sequence | MVARGEREHV LVVGGAGFIG SHVCQRLLRS GHRVTCVDSL VTGSVTNVAS LLDDARFRFV
ELDVTLPLPR WPDLGTPDSV LNLASPASPK DYQRLPIETL RTGSRGTEHT LELAVRHGAR
FVLTSTSEVY GDPLEHPQRE TYWGNVNPIG PRSVYDEAKR YAEALTMAYH RELGADVAIA
RVFNTYGPRM RTDDGRMIPN FITQALSGAP LTVAGSGTQT RSVCYVDDTV TGLLALWRSG
LTGPVNIGNP HELTVGQVAE EIRRITRTTS PVISIPGAVD DPRRRCPDIT VARTQLGWSP
EVGLHEGLRR TIAWFAASTE PVSHTSRTS
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