| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11250 |
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| Symbol | |
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| ID | 8386462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1160534 |
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| End bp | 1161616 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644975215 |
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| Product | ADP-heptose:LPS heptosyltransferase |
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| Protein accession | YP_003133008 |
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| Protein GI | 257055176 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.706344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.204518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCC GGGTCCTCGT CGCACGGTTG GACAACATCG GCGACGTGCT GTTGGCGGGT
CCGGCGGTGC GCGCCGTGGC GGCACACGCC GACCACGTCG CCCTGCTCGC GGGGCCGAGG
GGGCGCGCCG GCGCGGAGCT GCTGCCCGGG GTGGACGAGG TCGTGGAGTG GTGTGCGCCC
TGGATCGACC CGGAACCCCC CGAGGTCACC GGCGAGTCCG TCGACGCGCT CGTCACACGG
ATCCGCAGGC TACGGCTCGA CGCGGCACTC GTCCTCACCT CGTTCCACCA GTCGCCGTTG
CCGCTGGCGC TGCTGCTGCG GCTGGCGGGG GTGCCGTGGA TCGGCGCGAT CAGCGACGAC
TACCCCGGTT CGCTGCTCGA TCTGCGGCAC CGGGTCGACG ACGACCTCCC CGAGGCCGAA
CGGGCGCTGT CACTCGCCCA CGCCGCCGGA TTCCCCCTGC CGGAAGGCGA CGACGGCGCG
CTCGCCGTAC GCCACCCCCT GCCCGACACC CGCGCACTGA CCGGCCCGGA CCCCTTCGTG
GTCGTCCACC CGGCCGCGTC GGTCCCCGCC CGACAACCGA CGGAGGAACG CACCGCCGGG
ATCGTGGCCG CGCTCGTCGA CGCGGGTCAT CGCGTGATCG TCACGGGCGC CCCGGCCGAG
CGGGACCTGA CCGCCCGGGT CACCGCCGAG GCCGCGGCCC TGCTGCGTCA CCGTGCGGCC
GGGGTCGTCG ACCTGGGTGG TGCCACGTCC CTGCCCGAAC TCGCCTCCGT GTTGGCCGCC
GCCGACGTGG TGGTCGCCCC CAACACCGGC CCGGCCCATC TCGCCGCGGC CGTGGGCACC
CCCGTGGTGT CCTTGTTCGC CCCCGTGGTG CCCAGCTCCC GTTGGGCTCC CTACGGCGTC
CCCCGTGTCG TGCTGGGGGA CCAGGACGCA CGGTGCAAGG ACACCCGGGC ACGGCATTGC
CCCGTCCCGG GACATCCGTG CCTGCAGATC GACGCGGCGG AGGTGGTGAC GGCCGTCGAC
ACGCTCGCCC CGGAGCGTGG TGACGACCTC GTCGGCGCGA CGACTACTGG AGGTGTGTCG
TGA
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| Protein sequence | MTGRVLVARL DNIGDVLLAG PAVRAVAAHA DHVALLAGPR GRAGAELLPG VDEVVEWCAP
WIDPEPPEVT GESVDALVTR IRRLRLDAAL VLTSFHQSPL PLALLLRLAG VPWIGAISDD
YPGSLLDLRH RVDDDLPEAE RALSLAHAAG FPLPEGDDGA LAVRHPLPDT RALTGPDPFV
VVHPAASVPA RQPTEERTAG IVAALVDAGH RVIVTGAPAE RDLTARVTAE AAALLRHRAA
GVVDLGGATS LPELASVLAA ADVVVAPNTG PAHLAAAVGT PVVSLFAPVV PSSRWAPYGV
PRVVLGDQDA RCKDTRARHC PVPGHPCLQI DAAEVVTAVD TLAPERGDDL VGATTTGGVS
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