Gene Svir_11190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11190 
Symbol 
ID8386456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1154809 
End bp1155204 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID644975209 
Productpredicted signal-transduction protein containing cAMP-binding and CBS domains 
Protein accessionYP_003133002 
Protein GI257055170 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.170576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGG ATCCGGCCAT CGTCGAAACC AGTGAGACGG TGTCGCGAGC GGCTCGCAGG 
ATGGCTTCCG AAGGGGTCGG CGCGCTCCCC ATCAAGGGTG AGGACCACAA GCTCAAAGGC
ATGCTCACCG ACCGCGACAT CGTGGTGAAA GTGCTGGCAG AGGGCAAGGA TCCGGTGGCC
CTGCACGCCG GTGAGCTGGC ACAGGGCGAC GTCGTGTCGG TGGGGCCGGA CGAGGACGTC
TCCGTGGCGC TGGAGAAGAT GGCCCGACAC CAGCTGCGTC GCCTCCCCGT GGTGCAGGAG
GAGGAATTGG TCGGCATCGT GGCCCAGGCC GACGCCGCAC GGGAACTGTC GGACGCTGAT
GTGGGGAACA CGGTCGAGAA CATCTCCCGT GACTGA
 
Protein sequence
MTRDPAIVET SETVSRAARR MASEGVGALP IKGEDHKLKG MLTDRDIVVK VLAEGKDPVA 
LHAGELAQGD VVSVGPDEDV SVALEKMARH QLRRLPVVQE EELVGIVAQA DAARELSDAD
VGNTVENISR D