Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11100 |
Symbol | |
ID | 8386447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1145542 |
End bp | 1146405 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644975200 |
Product | 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase |
Protein accession | YP_003132993 |
Protein GI | 257055161 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.197382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCT ACGTCGAACT CGTGCGAGCG CCCGCCGCCC TGACGGCCGT GGGGGACACC GTGGCCGGTG GCGCGGCGGC CGGGACACCG CTGCGGGGCA GGCGGTTGTT GCTCCCCGCC GCGTCGGCGG CGTTCTACTG GGCGGGGATG GCGCTCAACG ACTGGGCCGA CCGGGAACTG GATGCCGTGG AACGGCCGGA ACGGCCCATC CCCTCGGGCC GGGTGAGCGC GGGCGCGGCG TTGGCCACCG GGAGCGCGCT CACCGCGGCC GGACTCGTAC TCGCCCGACT CGGCGGAGGC AAGCGGGCAT GGCGCACGGC CGTACCGTTG GCCGCCTGCG TGTGGGCCTA CGACACGACG TTGAAGGGCA CCGCGTTCGG CCCGGTCGGC ATGGCCGCGT GTCGGGCGCT GGACGTGCTG CTCGGCGCGG GTGGCCGGGA ACGCGCCGCC TTGACCGCGG CGGGCGTGCT CGGCGTGCAC ACCCTCGGGG TCACCGCGTT GTCGGCGGGC GAGGTCCACG GCACCTCTCG TGGCACCGCG GGCGGTGCCC TCGCGGCGAC GGCGGTGTCG ACCACGTTGG CGGCCCGGGG AACCGGTGGG ACCCGCCGCG GTGGTCGATG GCGTCGTGCG TTCACGGCGG CGCTGGCCGG TGCCTATGCG AGCTCCGTGG GCGGCGCCCA GTACGCGGCG CTGCGGGAGC CGTCGGCTCG GCACGCACGC CAGGCCACGA AGGCCGGTAT CCACGGCATG GTCCCACTGC AGGCCACCGT CGCGGCACGA CACGGCGCCG TGCGTTCCGC GGCGTTTCTG GTGACGGTCC TCCCATTGGC CCGGCGACTG GCAAGGAAGG TGAGCCCGAC GTGA
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Protein sequence | MKAYVELVRA PAALTAVGDT VAGGAAAGTP LRGRRLLLPA ASAAFYWAGM ALNDWADREL DAVERPERPI PSGRVSAGAA LATGSALTAA GLVLARLGGG KRAWRTAVPL AACVWAYDTT LKGTAFGPVG MAACRALDVL LGAGGRERAA LTAAGVLGVH TLGVTALSAG EVHGTSRGTA GGALAATAVS TTLAARGTGG TRRGGRWRRA FTAALAGAYA SSVGGAQYAA LREPSARHAR QATKAGIHGM VPLQATVAAR HGAVRSAAFL VTVLPLARRL ARKVSPT
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