Gene Svir_11100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11100 
Symbol 
ID8386447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1145542 
End bp1146405 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content75% 
IMG OID644975200 
Product4-hydroxybenzoate polyprenyltransferase-like prenyltransferase 
Protein accessionYP_003132993 
Protein GI257055161 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.197382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCT ACGTCGAACT CGTGCGAGCG CCCGCCGCCC TGACGGCCGT GGGGGACACC 
GTGGCCGGTG GCGCGGCGGC CGGGACACCG CTGCGGGGCA GGCGGTTGTT GCTCCCCGCC
GCGTCGGCGG CGTTCTACTG GGCGGGGATG GCGCTCAACG ACTGGGCCGA CCGGGAACTG
GATGCCGTGG AACGGCCGGA ACGGCCCATC CCCTCGGGCC GGGTGAGCGC GGGCGCGGCG
TTGGCCACCG GGAGCGCGCT CACCGCGGCC GGACTCGTAC TCGCCCGACT CGGCGGAGGC
AAGCGGGCAT GGCGCACGGC CGTACCGTTG GCCGCCTGCG TGTGGGCCTA CGACACGACG
TTGAAGGGCA CCGCGTTCGG CCCGGTCGGC ATGGCCGCGT GTCGGGCGCT GGACGTGCTG
CTCGGCGCGG GTGGCCGGGA ACGCGCCGCC TTGACCGCGG CGGGCGTGCT CGGCGTGCAC
ACCCTCGGGG TCACCGCGTT GTCGGCGGGC GAGGTCCACG GCACCTCTCG TGGCACCGCG
GGCGGTGCCC TCGCGGCGAC GGCGGTGTCG ACCACGTTGG CGGCCCGGGG AACCGGTGGG
ACCCGCCGCG GTGGTCGATG GCGTCGTGCG TTCACGGCGG CGCTGGCCGG TGCCTATGCG
AGCTCCGTGG GCGGCGCCCA GTACGCGGCG CTGCGGGAGC CGTCGGCTCG GCACGCACGC
CAGGCCACGA AGGCCGGTAT CCACGGCATG GTCCCACTGC AGGCCACCGT CGCGGCACGA
CACGGCGCCG TGCGTTCCGC GGCGTTTCTG GTGACGGTCC TCCCATTGGC CCGGCGACTG
GCAAGGAAGG TGAGCCCGAC GTGA
 
Protein sequence
MKAYVELVRA PAALTAVGDT VAGGAAAGTP LRGRRLLLPA ASAAFYWAGM ALNDWADREL 
DAVERPERPI PSGRVSAGAA LATGSALTAA GLVLARLGGG KRAWRTAVPL AACVWAYDTT
LKGTAFGPVG MAACRALDVL LGAGGRERAA LTAAGVLGVH TLGVTALSAG EVHGTSRGTA
GGALAATAVS TTLAARGTGG TRRGGRWRRA FTAALAGAYA SSVGGAQYAA LREPSARHAR
QATKAGIHGM VPLQATVAAR HGAVRSAAFL VTVLPLARRL ARKVSPT