Gene Svir_11090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11090 
Symbol 
ID8386446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1144397 
End bp1145545 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content68% 
IMG OID644975199 
Productmyo-inositol-1-phosphate synthase 
Protein accessionYP_003132992 
Protein GI257055160 
COG category[I] Lipid transport and metabolism 
COG ID[COG1260] Myo-inositol-1-phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.417407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCA CAGGGTTGTG GTTGATCGGT GCGCGGGGGT CGGTCGCCAC CACGGCGATC 
ACGGGACTGC TCGCGTTGCG GTCCGGGATC GTTCCCGGCG TCGGCTGTGT CAGTGCTCAA
CAGCAGTTCC GGAAGGTCCC GCTGCCCGAG TGGGACGAGA TCCACGTCGG TGGCCATGAC
ATCGTCGACA CCCCGCTGGA GAAGAGGGCC GAACTGCTCG CCGAGTCCGG TGTGATCCCG
CACCGGATCT TCGAAGCGGT GCGGCCCTCT CTGTCCGAAG TGGAGGACAA CATCCGGCCG
GGATACCATC CGGCCACCCA TGCGGGCACC CAGTCCGACG CGGCCCGCAC CCTCACCGAC
GACATCACCG CGTTCGCCCG CCGCAACGGA CTGGCCAGAG TCGTGGTGAT CAACGTGTCG
TCCACCGAGC CCGTGTTCCC CGCTCTGCCC GAACACGGCA GCCTCGACAC GTTAGAAGCG
GCCATGGCGG TACCGGGGCG CACCGTGTTG CCGCCGAGTT CCGTCGCGGT CTACGCGGCG
TTGCGGGCCG GATGTCCGTT CGTCGACTTC ACCCCATCCA CCGGGATCCG TCTCGCCGCG
CTGCAGGAAC TCGCGAAGAA ACAGCGATTG CCGTACGCGG GTTCGGACGG CAAGACCGGG
GAGACGCTCA TGCGCAGCGC ACTCGCGCCG ATGTTCACCA CGCGGGCGCT CGCGGTGCGG
TCGTGGACGG GCACGAACCT GCTCGGCGGC GGTGACGGGA GGACCTTGGC CGACGCCGAG
CACGCGAGCA GCAAGCTCCA GTCCAAGGGC CGGGGGCTGT CCACCCTGCT GGGCAGGGAG
GTCACCGCAC CCCTGCACAT CGACAACGTG CCCGACCTCG GTGAACAGAA GATCGCTTGG
GACCACGTGT CGTTCGAGGG CTTCCTCGGC GTGCGGATGA GCCTGCAGTT CACGTGGACC
GGCTACGACT CCTCGCTCGC CGCGCCGCTG GTGCTCGACC TGGCGCGGTT CACCGCGGCC
GCGCACGCCG CGGGACACAC CGGTCCGCTG GGCTCGTTGG CGTTCTTCTT CAAGGACCCG
ATGGGAACTG ACGAACATCG GCTCGGCGAA CAGTTCGCCA ACCTCGTGTC GTGGGCGGAA
ACGCTATGA
 
Protein sequence
MAPTGLWLIG ARGSVATTAI TGLLALRSGI VPGVGCVSAQ QQFRKVPLPE WDEIHVGGHD 
IVDTPLEKRA ELLAESGVIP HRIFEAVRPS LSEVEDNIRP GYHPATHAGT QSDAARTLTD
DITAFARRNG LARVVVINVS STEPVFPALP EHGSLDTLEA AMAVPGRTVL PPSSVAVYAA
LRAGCPFVDF TPSTGIRLAA LQELAKKQRL PYAGSDGKTG ETLMRSALAP MFTTRALAVR
SWTGTNLLGG GDGRTLADAE HASSKLQSKG RGLSTLLGRE VTAPLHIDNV PDLGEQKIAW
DHVSFEGFLG VRMSLQFTWT GYDSSLAAPL VLDLARFTAA AHAAGHTGPL GSLAFFFKDP
MGTDEHRLGE QFANLVSWAE TL