| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11080 |
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| Symbol | |
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| ID | 8386445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1139723 |
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| End bp | 1144240 |
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| Gene Length | 4518 bp |
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| Protein Length | 1505 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975198 |
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| Product | glucose/sorbosone dehydrogenase |
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| Protein accession | YP_003132991 |
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| Protein GI | 257055159 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.120578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.319442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCTGT GTACGGGATT GGGCAGCGGT GGGTTCACCC TCACCGCCGC CGCGGAGGAG
GCCCAGCCCG AGGCCAGTGT TCTGGTCTTC TCGAAGACGG CGGGCTTCCG ACACGACTCG
ATCCCCGCCG GGATCGAGGC CATCGAACAG TTGGGCGCGG AGCACAACTT CGCCGTGGAC
GCCACAGAGG ACGCCGAGGC GTTCACCGAC GACAACCTCG CCAACTACGA CGCCGTCGTG
TGGCTGTCCA CCACCGGCGA TGTACTGAAC GACGAACAGC AGGCGGCCTT CGAACGCTAC
ATCTCCGAAG GCGGCGGCTA TGTGGGAGTG CATGCCGCGT CCGACACCGA GTACGACTGG
CCGTGGTACG GCGACCTCGT GGGCGCCTAC TTCGACTCCC ACCCGCACAT CCAGGAAGCG
ACGGTCAACG TCGAGGACCG GGGGCATCCG TCCACAGCGG ACCTCCCGGA ACAGTGGGTA
CGCACCGACG AGTGGTACAA CTACCGGGAG AACCCGAGGC AGAACGTCCG TGTGCTGGCC
ACTCTCGACG AGGGCAGCTA CGATCCCGGC TCCGGGGCCA TGGGTGACGA TCACCCGATC
GCCTGGTGTC ATGAGAACAG CGGCGGCCGG GCCTGGTACA CCGGTGGCGG GCACACCGTC
GAATCCTTCA GCGAGCCGGA ATTCCTCGCC CACCTCGCCG GTGGGATCCA GTACGCGGCG
GGGCTGACCG ACGCCGATTG CTCGACGACC GACGAACCGG AACCGGAGGC GCCCGTCGAC
TCCGACTTCG ACCAGATCAC CCTGGCCCGG GGCGCGGACG TCACGGGTGA GCCGATGGCG
CTGTCGGTGC TGCCGGACGG CCGGGTGCTG CACACCTCGC GGGACGGTCG GGTCTTCCTG
ACCACCCCGG AGGGCAACAC GTCCGTGGCC GCGACCCTCG ACGTGTACAA CCACGACGAG
GACGGGCTGC AGGGCATCGC CGTCGACCCG AACTTCGAGG AGAACCACTG GGTCTACCTC
TACTACGCAC CGCCGCTGGA CACACCGCCC GGTGACGCGC CGGAGAACGG CAGCCCGGAG
GACTTCGAGC CGTTCAAGGG ATACAACCAG CTGTCGCGGT TCAAGCTCAC CGACGAGGGC
ACGTTGGATT TGTCCAGCGA ACAGCAGATC CTGCAGGTTC CCGCCGACCG GGGCATCTGC
TGCCACGCCG GTGGGGAGAT CGACTTCGAC GCCGACGGCA ACCTGCTGCT GTCCACAGGG
GACGACACGA ACCCGTTCGC CTCGGACGGG TACACGCCGA TCGACGAACG TTCGAACCGC
AACCCCGCGT TCGACGCGCA GCGCAGCTCG GGCAACACCA ACGACCTGCG CGGCAAGATC
CTGCGCATCA CGGTGCAGGA GGACGGCAGC TACACCATCC CCGAGGGCAA CCTGTTCGAA
CCGGGTACCG AGAAGACCCG TCCCGAGATC TACGCGATGG GCTTCCGCAA CCCGTTCCGG
TTCGCGGTGG ACAAGGAGAC CGGATGGATC TACGTCGGTG ACTACGGTCC CGACGCCGGT
TCGGCCAATC CCGACCGTGG TCCGGCGGGC ACCGTGGAGT TCAACCTCGT GACCGGTCCG
GGCAACTACG GATGGCCGTA CTGTGTCGGC GACAACGAAC CGTTCATCGA CTACGACTTC
GAAAGCGGCA CCCCGGGTGA GGCGTTCGAC TGCTCGGCGC CGGTGAACGA CAGCCCGAAC
AACACGGGTC TGACCGAACT GCCGCCCGCG CAGCCCGCGT GGATTCCGTA CGACGGCGGC
TCGGTGCCCG AGTTCGGCAC CGGCGGTGAG TCGCCGATGG GTGGTCCCGT CTACCGCTTC
GACCCGGAGC TGGAGTCGAA CACGAAGTTC CCCGAGTACT ACGACGGCAA GAACTTCGCC
TACGAATGGG ACCGCGGCTG GATCAAGACG ATCGAGGTCG GCGAGAACGG TGAGCGGGGC
GCCATCGAAC CGTTCTTCGA GTCGATGGAG CTGACCCGGC CGATGAACAT CGAGTTCGGC
CCCGAGGGAT CGCTGTACGT CCTGGACTAC GGCAGCGGCT ACTTCGGTGG CGCGGAGGAC
TCGGCGCTGT ACCGCATCGA CTACACGAAG GGCAACCGCA CGCCGCAGGT CTCGCTGTCG
GCCGATGTGA CCTCGGGACA GGCACCGTTG GAGGTCACGT TCGAGCCGTC GGCCGAGGAC
GCCGACGGGG ACGAGCTGAC GTTCGCATGG GACTTCGACG GGGACGGTGA GACCGACTCG
ACCGAGGCCG GTCCGGTGAC CCACACCTAC ACCGAGAACG GCCAGTACCA CGCGAAACTG
TCGGTGACCG ACCCCGGTGG GCTGTCCGGC AGCGCGAGCG TGGTGATCAC CGTGGGCAAC
ACCGAGCCGA CGGTGAAGCT GGAGACGCCG GTCAACGGTG GGTTCTTCGG TTTCGGTGAC
CTCGTGCCGT TCACGGTCAC GGTGACCGAC CCGGAGGACG GGGAGATCGA CTGCTCCAAG
GTCACGGTGG AGTACATCCT CGGCCACGAC AACCACGGCC ACCCGTTGTC GCGGGCGTCC
GGTTGTGAGG GGGTCATCGA GACCCCGGCC GACGAGGGCC ACGGACTCGA CGCCCACATC
TTCGGTGTCA TCGACGCGCG TTACACCGAC AACGGTGGGG CCGAGGGCGT GCCCGCGTTG
ACCGGTTCGG ACCAGAACAT CCTCCAGCCG AAGATCAAGC AGGCTGAGTT CTTCACCGAA
CTGGAAGGCG TCGAGGTCGT CACGGCCTCC GGTGCCAGCG GTGGCAAGCG GGTTGGCTAC
ATCGACGACG GTGACTGGAT CAAGCTCGAC CCGGTCAACC TGGTGGGGGT CGACAGCATC
ACCTACCGCG TGTCCTCCGG TGGCCCGGGC GGCACGATCG AGGCCCGTGC GGGCGCGTTG
GACGGTCCCG TGGTGCACAC GGTGGAGGTA CCGAACACGG GTGGTTGGGA CTCCTACACC
GAGGTCGGCC CCGTGGAGGT CACCGATCCG GGTGGTACCC AGCCGTTGTA TCTGGTGTTC
CACGGTGAGG GTGATGGAGG ATTGTTCGAC GTGGACGTCC TCCACGTCAA CGGCGCCGGT
GTTGCCCAGC CCGGCACTTC TCCGGCCGAA TGTGAGCCGG CGGAGCCCGA GGAGGGTTAC
CGGATGCTGT TCGACGGCAC CGCGGCCAGC CTGGAGAACT GGAATCAAGC CGGTCCCGGT
TCCTTCGAGC TCGGTGACGA CTGCACCATC AAGTCGGTCG GTGGCATGGG GCTGCTGTGG
TACGACGAGC AGTTCGGTGC CTACAGCCTC AAGCTCGACT GGAAGATGGC CGGCGACGAC
AACTCCGGCG TGTTCGTCGG ATTCCCGGAC CCGGGCGACG ATCCGTGGGT GGCGGTGAAC
GAGGGGTACG AGATCCAGAT CGACCCCACC GACGATCCCG ACAAGACCAC GGGTGCCATC
TACGGCTTCC AGTCGGCGGA CCTGGAGGCC CGGGACGCGG CGCTCAACCC GCCGGGGGAG
TGGAACTCCT ACGAGATCGT GGTCCGCGAC CAGACGATCC AGGTGTACCT CAACGACACC
CTGATCAACG ATTTCGTCAG CACCGACCCG AACCGGGATC TGACGCAGGG ATTCGTGGGG
CTGCAGAACC ACGGTGACGA GGACGAGGTC TGGTTCCGCA ACGTCCAGAT CCGCGACCTC
GACACCACGG CCCCGGCCAC CGAGGCGTCG TTCGCCGAAC CCGGCGCGAA CGGCTGGCAC
AACGGCGAGG TCGGGGTCAC CCTGACGGCC ACGGACGAGG GTTCCGGGGT CGAACGCATC
GAGTACAGCC TCGACGGTGG GGACTGGACC ACCTACACCG AGCCGGTCGT GATCAGTGGT
GACGGCGAGC ACACGATGCT GTACCGGGCG GTGGACAAGG CGGGCAACGT CGAGAACGAC
AAGGCCGTCA CGATCAGGAT CGACGGCACC GCCCCGACGG TGATGATCGC CGGTGTCGCC
GACGGCTTCG TCTACGGCGA CGCCGAGGAG CTCACCATCA GCTGGGAAGC GCGGGACGGG
ACGTCCGGTG TGGAATCCGC GGCCGCGGAA CTCGACGGTG AGGCCCTCGA GTCGGGCACC
ACGGTGCCGT TGTATCCGCT CGACCTCGGC GAGCACTCAC TCACCGTGAG CGCCACCGAC
AAGGCGGGCA ACACCGCGGA GCACACGCTG ACGTTCACCT CCACGACGTC GTTCGACGAC
GTGGCGTCCC TGATTCGGAG GTTCGCGGCG GAGGACAAAC TCACCACGGC GGAGAAGGTG
GTCCTGTCGG CGGAGTTGGC CCTGGCCAAA CGCGCGAGCG AGGGTGGTCG GACGACACCG
GCTGTCGTGC TGATGCGGTT GTTCATCGGT ATGGCCCAGC ACGTGTCCGA CGACGATGCC
CGAGACACGC TCGTGCGAGA CGGACGGGCG CTGCTCGGCC ACATCGACGG AAGCGCACCG
ATACCCGTCG TTTCGTGA
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| Protein sequence | MALCTGLGSG GFTLTAAAEE AQPEASVLVF SKTAGFRHDS IPAGIEAIEQ LGAEHNFAVD
ATEDAEAFTD DNLANYDAVV WLSTTGDVLN DEQQAAFERY ISEGGGYVGV HAASDTEYDW
PWYGDLVGAY FDSHPHIQEA TVNVEDRGHP STADLPEQWV RTDEWYNYRE NPRQNVRVLA
TLDEGSYDPG SGAMGDDHPI AWCHENSGGR AWYTGGGHTV ESFSEPEFLA HLAGGIQYAA
GLTDADCSTT DEPEPEAPVD SDFDQITLAR GADVTGEPMA LSVLPDGRVL HTSRDGRVFL
TTPEGNTSVA ATLDVYNHDE DGLQGIAVDP NFEENHWVYL YYAPPLDTPP GDAPENGSPE
DFEPFKGYNQ LSRFKLTDEG TLDLSSEQQI LQVPADRGIC CHAGGEIDFD ADGNLLLSTG
DDTNPFASDG YTPIDERSNR NPAFDAQRSS GNTNDLRGKI LRITVQEDGS YTIPEGNLFE
PGTEKTRPEI YAMGFRNPFR FAVDKETGWI YVGDYGPDAG SANPDRGPAG TVEFNLVTGP
GNYGWPYCVG DNEPFIDYDF ESGTPGEAFD CSAPVNDSPN NTGLTELPPA QPAWIPYDGG
SVPEFGTGGE SPMGGPVYRF DPELESNTKF PEYYDGKNFA YEWDRGWIKT IEVGENGERG
AIEPFFESME LTRPMNIEFG PEGSLYVLDY GSGYFGGAED SALYRIDYTK GNRTPQVSLS
ADVTSGQAPL EVTFEPSAED ADGDELTFAW DFDGDGETDS TEAGPVTHTY TENGQYHAKL
SVTDPGGLSG SASVVITVGN TEPTVKLETP VNGGFFGFGD LVPFTVTVTD PEDGEIDCSK
VTVEYILGHD NHGHPLSRAS GCEGVIETPA DEGHGLDAHI FGVIDARYTD NGGAEGVPAL
TGSDQNILQP KIKQAEFFTE LEGVEVVTAS GASGGKRVGY IDDGDWIKLD PVNLVGVDSI
TYRVSSGGPG GTIEARAGAL DGPVVHTVEV PNTGGWDSYT EVGPVEVTDP GGTQPLYLVF
HGEGDGGLFD VDVLHVNGAG VAQPGTSPAE CEPAEPEEGY RMLFDGTAAS LENWNQAGPG
SFELGDDCTI KSVGGMGLLW YDEQFGAYSL KLDWKMAGDD NSGVFVGFPD PGDDPWVAVN
EGYEIQIDPT DDPDKTTGAI YGFQSADLEA RDAALNPPGE WNSYEIVVRD QTIQVYLNDT
LINDFVSTDP NRDLTQGFVG LQNHGDEDEV WFRNVQIRDL DTTAPATEAS FAEPGANGWH
NGEVGVTLTA TDEGSGVERI EYSLDGGDWT TYTEPVVISG DGEHTMLYRA VDKAGNVEND
KAVTIRIDGT APTVMIAGVA DGFVYGDAEE LTISWEARDG TSGVESAAAE LDGEALESGT
TVPLYPLDLG EHSLTVSATD KAGNTAEHTL TFTSTTSFDD VASLIRRFAA EDKLTTAEKV
VLSAELALAK RASEGGRTTP AVVLMRLFIG MAQHVSDDDA RDTLVRDGRA LLGHIDGSAP
IPVVS
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