| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11060 |
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| Symbol | |
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| ID | 8386443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1137403 |
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| End bp | 1138446 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644975196 |
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| Product | monosaccharide-binding protein |
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| Protein accession | YP_003132989 |
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| Protein GI | 257055157 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.739873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CGCGCCGTGG CTTCCTGTTA TCCGCCGCGG GACTGGGCGC GACAGCGGTA
CTGGCGGGAT GTACCTCCAA TGAGAAACCC GCCTCCGGCT CCCAAGCCCA AAACGGTGCG
CAGAACACCA ACACCGAACC GGGTAAGCCA GTCACCATCG GTTTCTCCGC CCCCGCTGCC
GACCACGGCT GGATGGCCGC CATGACCATC AACGCGCGGG AGACGGCCGA GCAGTACCCG
GACGTCACGT TGGAGGCCAC GGAGGGCACC AACGACGTCA ATCAGCAGAT CGCACAGGTC
GAGACCCTCA TCAGCAACGG TGTGGACGCG TTGGTGATCC TGCCGTTCGA CGGTAAGGCG
CTCACCCAGG TCGGCAGACA GGCCATGGAC GAGGGGATCC CGGTGGTCAA TGTGGACCGG
GTGTTCGACA CGCCGTTGGC CTATCGGACC TGGATCGGCG GTGACAACTA TCGAATGGGG
GTCAACGCGG GGAACTACAT CGCCGAGGAA CTCAAGCGAC GCGGCATCAG CGATCCGGTG
ATCGGTGAGG TCGCGGGAAT GGACAACCTG CCTCTCACCC AGGAGCGTAG CAAGGGCTTC
GCCGATGCAC TCGCCACGCA CGGACTCGAG GTCACCCACC GGGTCGCCGC GGAGTTCACC
CCCGAGTCGG GGGAGAGGCA GACGGCCAAC CTGCTGCAGG CGGCCCGGAG ACTGGACGCG
TTGTGGAACC ACGACGACGA CCAGGGAATC GGCGTGGTGG CCGCCATCGA CGCCGCGGGA
CGCGACGACT TCTTCATGGT GGGCGGAGCC GGGTCGCGCA ACATGATGGA CCTCATCAAG
GCCGATTCGG GGCCGGTGAA GGCCACCGTG CTGTACAGCC CCTCGATGGC GTCGTCGGCG
ATTTCGCTGG CGAGGTTGCT CGGACAGAGT AAGGGGATGT CCGATCTCAC CGAGCACGAG
ATCCCCGCCG AGATCACGAC CTACTCGGCG GTGGTCACAA AGGACAATGT GGATTCATAT
CTCGACGTTG GGTTCGATTC GTGA
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| Protein sequence | MTLARRGFLL SAAGLGATAV LAGCTSNEKP ASGSQAQNGA QNTNTEPGKP VTIGFSAPAA
DHGWMAAMTI NARETAEQYP DVTLEATEGT NDVNQQIAQV ETLISNGVDA LVILPFDGKA
LTQVGRQAMD EGIPVVNVDR VFDTPLAYRT WIGGDNYRMG VNAGNYIAEE LKRRGISDPV
IGEVAGMDNL PLTQERSKGF ADALATHGLE VTHRVAAEFT PESGERQTAN LLQAARRLDA
LWNHDDDQGI GVVAAIDAAG RDDFFMVGGA GSRNMMDLIK ADSGPVKATV LYSPSMASSA
ISLARLLGQS KGMSDLTEHE IPAEITTYSA VVTKDNVDSY LDVGFDS
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