Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_10940 |
Symbol | |
ID | 8386431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1127008 |
End bp | 1127469 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975184 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003132977 |
Protein GI | 257055145 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.07291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAAGC TCGCCGACTA CCTCACCATC GGACAGGTGG CCCAACGAAG CGGGGTTCCC CATACCGCGC TCCGGTTCTA CGAGGACCGT GGCCTGATCT TCGCCGAGCG GACGTCGGGT AATCAGCGGC GGTACCCGCG GTCGGTGTTG CGTCGGATCG CGTTCATCCG CTCGGCCCAG CGAGTCGGTC TGACATTGGA GCAGATCAGC GAGGCGTTGT CCGCCCTGCC CCACGACCAC GCACCGACGA AGGCCGATTG GGCACGACTG TCCCGGAGGT GGCGGGACGA ACTCGATGCC CGAATCGACG CGCTGCAACG ACTGCGGGAC CAACTCACCG ACTGCGTCGG CTGCGGCTGC TTGTCACTGC GTACGTGCGC CCTCAACAAT CCGGACGACC GGATCGGCGC CCTGGGACCC GGGGCCCCGG GCCTGAAACC CAAATCAGAA GGCGGCCTCT GA
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Protein sequence | MPKLADYLTI GQVAQRSGVP HTALRFYEDR GLIFAERTSG NQRRYPRSVL RRIAFIRSAQ RVGLTLEQIS EALSALPHDH APTKADWARL SRRWRDELDA RIDALQRLRD QLTDCVGCGC LSLRTCALNN PDDRIGALGP GAPGLKPKSE GGL
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