Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_10910 |
Symbol | |
ID | 8386428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1123186 |
End bp | 1125372 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975181 |
Product | predicted RND superfamily drug exporter |
Protein accession | YP_003132974 |
Protein GI | 257055142 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0552916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCACCT TCCTCGCCCG ACTCGGTCGT GCGTCCTTTC GGCGACGCCG CCTGGTCACC AGTCTGTGGG TGCTCCTGCT CGTGGTCTTC GGCATCGGCG CCCTCACGAT GTCCGGGCAG ACCACCAACT CCGTGACCAT CCCCGGCACG GAGGCGCAGC AAGCCATCGA CCGCCTCGAG GAGAGGTTCC CGGAAGCAGG GGTCGGCAAG GGCTCGGTGA ACGTCGCCGT CGCACCACCC GAGGGACAGC AGCTCGACCC GCAGATCGTG GCCGGACTCG TCAAGAACCT CGGTGAAGCG CCGAACGTCG CCACCGTCAC CGACCCGTTC CAGACGAAGT CGATCGCACC CGACGGCTCG CTCGCCCTGA TCCAGGTCGT CTACCGGATG CCCTCGCCGG AGGTCACCGA CGCCGATCGG GACGCGCTCC AAGCCGCCGC CCAGTCCACA CGCGACGCGG GCTGGACGGT CGAGTTCGGC GGGGACGCCA TGCAGGGCAT CCCGGTCACC CAACCCACCG AAGGCATCGG CGTGATCGTC GCCGCCGTCG TGCTCATCGT CACATTCGGT TCACTGGTCG CGGCCGGACT CCCCCTGGTC ACGGCGCTGA TCGGCGTCGG CATCGGCATG GCCGGCATCA CCGCCCTGTC GGGGGTCGTC GACCTCAACG CCAACACCCC GGTGCTCGCG CTGATGATCG GCCTCGCCGT CGGCATCGAC TACGCGCTGT TCATCGTGTC CCGTTACCGC ACCGAACTGG AAAGCGGGGC GGCCCCCGAG GACGCCGCCG CCACGGCCGT GGGCACCGCG GGTTCGGCCG TCGTGTTCGC CGGGCTGACC GTCATCATCG CGCTCGCCGG GCTCACCGTG GTGGGCATCC CCATCCTCGG CCAGATGGGA CTGGCGGCCT CGGCCACCGT CGCCATCGCC GTCCTCATCG CCGTCACGCT CCTGCCCGCC GTCCTCGGCT TCGCGGGCAC CAAGGTGCTC GGCGGCCGGA TACCGGGTCT GCGCCGTCCG GCGAGGCCCG GGCCGACCGC GGGCTGGCGG TGGTCCTCCT TCCTCGCCCG TCGGCGTGTC GTGATGTTGC TCGCGACCGT GGCCGGTCTC GCGGTGTTGG CCGTTCCCGC CGCGGACATG CGACTCGGTC TGCCCAACGA CGCCACCGCC GCCCCCGATT CGACACAGCG CAAGGCCTAC GACCTGATCA GCGAAAGCTT CGGCCCCGGC CTGAACGGTC CCCTCGTCGT CGTGCTCGAC GCGGCGAACG ACCCGCAGAG CGCGACACAG GCCGCGATGC AACGCATCAA CGCGCTCGAC AACGTGGCCA TGGTCATGCC GCCCCAGTTC AACCGCGCAC ACGACACGGC ATTGCTCACC GTGATCCCCT CGACCGGTCC GGAGACCCAG GAGACCGAGG ACCTCGTCGC CGACATCCGC GCGCTGAGCG GCCAGCTGGA AGCCGACACC GGTGCCACCA TGTCGGTCAC CGGTGCCACC GCCATGGACA TCGACATCTC CCAGCGGATG GCCGACGCCC TGCTGCCCTA CCTCTCCCTG GTCGTCGGGT TGGCGTTCAT CCTGCTGATG ATCGTGTTCC GGTCGGTCCT CGTGCCGCTT TCGGCGACCC TGGGCTTCCT CGGTTCCGTC GGCGCCACGT TCGGCGCGGT CGTGGCCGTG TTCCAGTGGG GTTGGCTCGG CGACCTGCTC GGCGTCGACG CCACCGGGCC GGTCATGAGC GTGCTGCCCG TCCTGCTGAT CGGTGTGCTG TTCGGCCTCG CCATGGACTA CCAGGTGTTC TTGGTGACCC GCATGCGCGA GGAATACGTC CACGGTCGGT CCCCCGACGA GGCGATGATC ACCGGCTTCA AGCACGGCTC ACGCGTCGTG GTGGCCGCCG CGCTCATCAT GATCAGCGTG TTCGCCGGTT TCGTCCTCGC CGAGTCGGTC CTCATCCAGT CGATCGGATT CGCGCTCGCG TTCGGGGTGG CCGTGGACGC GTTCGTGGTG CGGATGACCA TCGTGCCCGC CCTGATGTCG TTGCTCGGCC GGAGCGCGTG GTGGTTGCCT CGCTGGCTGG ACCGCGTCCT GCCCAACGTG GACGTGGAGG GCGAGAAGCT CACCCGGGGA ACGGGCGGCG ACGGCGGCTC CGACGGCGAC CGTGAACTGG AACCGCTCGC CCGTTAG
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Protein sequence | MATFLARLGR ASFRRRRLVT SLWVLLLVVF GIGALTMSGQ TTNSVTIPGT EAQQAIDRLE ERFPEAGVGK GSVNVAVAPP EGQQLDPQIV AGLVKNLGEA PNVATVTDPF QTKSIAPDGS LALIQVVYRM PSPEVTDADR DALQAAAQST RDAGWTVEFG GDAMQGIPVT QPTEGIGVIV AAVVLIVTFG SLVAAGLPLV TALIGVGIGM AGITALSGVV DLNANTPVLA LMIGLAVGID YALFIVSRYR TELESGAAPE DAAATAVGTA GSAVVFAGLT VIIALAGLTV VGIPILGQMG LAASATVAIA VLIAVTLLPA VLGFAGTKVL GGRIPGLRRP ARPGPTAGWR WSSFLARRRV VMLLATVAGL AVLAVPAADM RLGLPNDATA APDSTQRKAY DLISESFGPG LNGPLVVVLD AANDPQSATQ AAMQRINALD NVAMVMPPQF NRAHDTALLT VIPSTGPETQ ETEDLVADIR ALSGQLEADT GATMSVTGAT AMDIDISQRM ADALLPYLSL VVGLAFILLM IVFRSVLVPL SATLGFLGSV GATFGAVVAV FQWGWLGDLL GVDATGPVMS VLPVLLIGVL FGLAMDYQVF LVTRMREEYV HGRSPDEAMI TGFKHGSRVV VAAALIMISV FAGFVLAESV LIQSIGFALA FGVAVDAFVV RMTIVPALMS LLGRSAWWLP RWLDRVLPNV DVEGEKLTRG TGGDGGSDGD RELEPLAR
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