Gene Svir_10910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10910 
Symbol 
ID8386428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1123186 
End bp1125372 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content70% 
IMG OID644975181 
Productpredicted RND superfamily drug exporter 
Protein accessionYP_003132974 
Protein GI257055142 
COG category[R] General function prediction only 
COG ID[COG2409] Predicted drug exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0552916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACCT TCCTCGCCCG ACTCGGTCGT GCGTCCTTTC GGCGACGCCG CCTGGTCACC 
AGTCTGTGGG TGCTCCTGCT CGTGGTCTTC GGCATCGGCG CCCTCACGAT GTCCGGGCAG
ACCACCAACT CCGTGACCAT CCCCGGCACG GAGGCGCAGC AAGCCATCGA CCGCCTCGAG
GAGAGGTTCC CGGAAGCAGG GGTCGGCAAG GGCTCGGTGA ACGTCGCCGT CGCACCACCC
GAGGGACAGC AGCTCGACCC GCAGATCGTG GCCGGACTCG TCAAGAACCT CGGTGAAGCG
CCGAACGTCG CCACCGTCAC CGACCCGTTC CAGACGAAGT CGATCGCACC CGACGGCTCG
CTCGCCCTGA TCCAGGTCGT CTACCGGATG CCCTCGCCGG AGGTCACCGA CGCCGATCGG
GACGCGCTCC AAGCCGCCGC CCAGTCCACA CGCGACGCGG GCTGGACGGT CGAGTTCGGC
GGGGACGCCA TGCAGGGCAT CCCGGTCACC CAACCCACCG AAGGCATCGG CGTGATCGTC
GCCGCCGTCG TGCTCATCGT CACATTCGGT TCACTGGTCG CGGCCGGACT CCCCCTGGTC
ACGGCGCTGA TCGGCGTCGG CATCGGCATG GCCGGCATCA CCGCCCTGTC GGGGGTCGTC
GACCTCAACG CCAACACCCC GGTGCTCGCG CTGATGATCG GCCTCGCCGT CGGCATCGAC
TACGCGCTGT TCATCGTGTC CCGTTACCGC ACCGAACTGG AAAGCGGGGC GGCCCCCGAG
GACGCCGCCG CCACGGCCGT GGGCACCGCG GGTTCGGCCG TCGTGTTCGC CGGGCTGACC
GTCATCATCG CGCTCGCCGG GCTCACCGTG GTGGGCATCC CCATCCTCGG CCAGATGGGA
CTGGCGGCCT CGGCCACCGT CGCCATCGCC GTCCTCATCG CCGTCACGCT CCTGCCCGCC
GTCCTCGGCT TCGCGGGCAC CAAGGTGCTC GGCGGCCGGA TACCGGGTCT GCGCCGTCCG
GCGAGGCCCG GGCCGACCGC GGGCTGGCGG TGGTCCTCCT TCCTCGCCCG TCGGCGTGTC
GTGATGTTGC TCGCGACCGT GGCCGGTCTC GCGGTGTTGG CCGTTCCCGC CGCGGACATG
CGACTCGGTC TGCCCAACGA CGCCACCGCC GCCCCCGATT CGACACAGCG CAAGGCCTAC
GACCTGATCA GCGAAAGCTT CGGCCCCGGC CTGAACGGTC CCCTCGTCGT CGTGCTCGAC
GCGGCGAACG ACCCGCAGAG CGCGACACAG GCCGCGATGC AACGCATCAA CGCGCTCGAC
AACGTGGCCA TGGTCATGCC GCCCCAGTTC AACCGCGCAC ACGACACGGC ATTGCTCACC
GTGATCCCCT CGACCGGTCC GGAGACCCAG GAGACCGAGG ACCTCGTCGC CGACATCCGC
GCGCTGAGCG GCCAGCTGGA AGCCGACACC GGTGCCACCA TGTCGGTCAC CGGTGCCACC
GCCATGGACA TCGACATCTC CCAGCGGATG GCCGACGCCC TGCTGCCCTA CCTCTCCCTG
GTCGTCGGGT TGGCGTTCAT CCTGCTGATG ATCGTGTTCC GGTCGGTCCT CGTGCCGCTT
TCGGCGACCC TGGGCTTCCT CGGTTCCGTC GGCGCCACGT TCGGCGCGGT CGTGGCCGTG
TTCCAGTGGG GTTGGCTCGG CGACCTGCTC GGCGTCGACG CCACCGGGCC GGTCATGAGC
GTGCTGCCCG TCCTGCTGAT CGGTGTGCTG TTCGGCCTCG CCATGGACTA CCAGGTGTTC
TTGGTGACCC GCATGCGCGA GGAATACGTC CACGGTCGGT CCCCCGACGA GGCGATGATC
ACCGGCTTCA AGCACGGCTC ACGCGTCGTG GTGGCCGCCG CGCTCATCAT GATCAGCGTG
TTCGCCGGTT TCGTCCTCGC CGAGTCGGTC CTCATCCAGT CGATCGGATT CGCGCTCGCG
TTCGGGGTGG CCGTGGACGC GTTCGTGGTG CGGATGACCA TCGTGCCCGC CCTGATGTCG
TTGCTCGGCC GGAGCGCGTG GTGGTTGCCT CGCTGGCTGG ACCGCGTCCT GCCCAACGTG
GACGTGGAGG GCGAGAAGCT CACCCGGGGA ACGGGCGGCG ACGGCGGCTC CGACGGCGAC
CGTGAACTGG AACCGCTCGC CCGTTAG
 
Protein sequence
MATFLARLGR ASFRRRRLVT SLWVLLLVVF GIGALTMSGQ TTNSVTIPGT EAQQAIDRLE 
ERFPEAGVGK GSVNVAVAPP EGQQLDPQIV AGLVKNLGEA PNVATVTDPF QTKSIAPDGS
LALIQVVYRM PSPEVTDADR DALQAAAQST RDAGWTVEFG GDAMQGIPVT QPTEGIGVIV
AAVVLIVTFG SLVAAGLPLV TALIGVGIGM AGITALSGVV DLNANTPVLA LMIGLAVGID
YALFIVSRYR TELESGAAPE DAAATAVGTA GSAVVFAGLT VIIALAGLTV VGIPILGQMG
LAASATVAIA VLIAVTLLPA VLGFAGTKVL GGRIPGLRRP ARPGPTAGWR WSSFLARRRV
VMLLATVAGL AVLAVPAADM RLGLPNDATA APDSTQRKAY DLISESFGPG LNGPLVVVLD
AANDPQSATQ AAMQRINALD NVAMVMPPQF NRAHDTALLT VIPSTGPETQ ETEDLVADIR
ALSGQLEADT GATMSVTGAT AMDIDISQRM ADALLPYLSL VVGLAFILLM IVFRSVLVPL
SATLGFLGSV GATFGAVVAV FQWGWLGDLL GVDATGPVMS VLPVLLIGVL FGLAMDYQVF
LVTRMREEYV HGRSPDEAMI TGFKHGSRVV VAAALIMISV FAGFVLAESV LIQSIGFALA
FGVAVDAFVV RMTIVPALMS LLGRSAWWLP RWLDRVLPNV DVEGEKLTRG TGGDGGSDGD
RELEPLAR