| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10860 |
|---|
| Symbol | |
|---|
| ID | 8386423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1119109 |
|---|
| End bp | 1119921 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644975176 |
|---|
| Product | predicted amidohydrolase |
|---|
| Protein accession | YP_003132969 |
|---|
| Protein GI | 257055137 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.571938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTTTGT GCCAGCTCAC ATCCAGTGCC GATCCTGCGG AGAACCTCCG TCTGGTCCGG
GAGTGGACGG CCTCCGCCGC GGCCCGGGGA GCACGCGTCG TGGTGTTCCC GGAAGCGACG
ATGGCGCGTT TCGGCGTGCC CCTCGCCCCG CTCGCGGAAC CCCTCGACGG CCCGTGGGCA
CAGGCGGTGC GCGAGATCGC CGACGAGGCC GGAGTGCTCA TCGTCGCGGG CATGTTCACC
CCCGATGGGG AACGGATCCG CAACACCCTG CTCATCACCG GTCTCGGCCT GCACCTCGGC
TACGACAAGA TCCACCTCTA CGACGCTTTC GGTTTCCGCG AGTCCGACAC GGTCGCCCCG
GGTTCGCGAC CGGTGACCGC CACGGTCGAC GGCGTGACAC TCGGCTTCGC GACCTGTTAC
GACGTCCGGT TCCCCGAACT GTTCCAGACA CTCGCCGACG CGGGCAGCAG CGTCGTCGTA
CTGCCCACGT CGTGGGGCGC GGGGAAGGGC AAACGCGAAC AGTGGGAACT GCTGGTGCGC
GCCCGGGCAC TCGACTCCGG CACGTGGGTC CTGGGCTGTG ACCAGGCCGA CCCCGCCGCC
ACCGGCGTCG AGGTGCATCC GAAAGCACCC ACCGGGATCG GCTACTCCAC CGTCGCCGAC
CCCTTCGGCG GGGTACACGC CCAGCTCGAC GCCGCGCCGG ATCTGCTCGT CACCGACATC
GACCCCACCC ACGCCGAAGC CTCCCGCAAG GCCACCGGAG TGCTGGCGAA CCGGATCAGC
GGCCTGGGCC GGCCTTCAAA ACGGGCCGAT TGA
|
|---|
| Protein sequence | MGLCQLTSSA DPAENLRLVR EWTASAAARG ARVVVFPEAT MARFGVPLAP LAEPLDGPWA
QAVREIADEA GVLIVAGMFT PDGERIRNTL LITGLGLHLG YDKIHLYDAF GFRESDTVAP
GSRPVTATVD GVTLGFATCY DVRFPELFQT LADAGSSVVV LPTSWGAGKG KREQWELLVR
ARALDSGTWV LGCDQADPAA TGVEVHPKAP TGIGYSTVAD PFGGVHAQLD AAPDLLVTDI
DPTHAEASRK ATGVLANRIS GLGRPSKRAD
|
|---|
| |