Gene Svir_10850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10850 
Symbol 
ID8386422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1118215 
End bp1119087 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID644975175 
Productnicotinate-nucleotide pyrophosphorylase (carboxylating) 
Protein accessionYP_003132968 
Protein GI257055136 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.199467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC TGGACGGTGA AGTGGACCCC GCCGAGGTGC GGCGCGTGGT GGCCACCGCG 
TTGGAGGAGG ATCTCCGGTA CGGGCCGGAC GTCACCACAC AGGCCACGGT GCCCGCGGCG
GCGACGGCCG TCGCCGAGTT GACCCCGCGG GTGTCGGGGG TCGTGGCGGG AGTCGGCGTG
GCGAGGACCG TGTTCGACAC CGTGCTCGCC GGTGACGGCT ACGAGGTGGT GTCCGCGCGT
GCCGACGGCA GTTTCCTGGA GGCGGGAGAA CCCGCACTGG TGGTCCGCGG ACCGGTTCGG
GGACTGCTGA CCGCCGAACG GACGGCGCTG AACCTGTTGT GCCATCTGTC CGGTGTGGCG
ACCGTGACGG CGGCGTGGGT GCGGGCCGTG GCGGGTACGG GGTGCGCGAT CCGTGACTCC
CGCAAGACGC TGCCGGGCCT GCGGGTGCTG GAGAAGTACG CGGTGCGCTG CGGGGGAGGC
GTCAATCACC GGATGGGTCT CGGCGACGCC GTGCTGATCA AGGACAACCA CGTCGTGGCG
GCGGGTTCGG TCACCGAGGC GTTGCGCCTG GCCCGCGAGA AGGCGGCGGG ACTGCCGTGT
GAGGTGGAGG TGGACGACCT CGACCAGCTG GCGGAGACGC TGCACGCCGG TGCCGACGAA
GTACTGCTGG ACAACTTCAG CCCCGAGGAC TGCGAGCGCG CGGTGCGCCT GCGCGACGAG
TTGTCGCCGA AGACGCGGCT GGAGGCCTCG GGCGGCCTGA AGCTCGACGA CGCCCGCCGC
TACGCCGAAA CGGGTGTGGA CTACCTCGCG GTGGGGGCCT TGACCCACTC GGCCCCGGCT
CTTGACATCG GCATGGATCT GCGGAGTACG TGA
 
Protein sequence
MSGLDGEVDP AEVRRVVATA LEEDLRYGPD VTTQATVPAA ATAVAELTPR VSGVVAGVGV 
ARTVFDTVLA GDGYEVVSAR ADGSFLEAGE PALVVRGPVR GLLTAERTAL NLLCHLSGVA
TVTAAWVRAV AGTGCAIRDS RKTLPGLRVL EKYAVRCGGG VNHRMGLGDA VLIKDNHVVA
AGSVTEALRL AREKAAGLPC EVEVDDLDQL AETLHAGADE VLLDNFSPED CERAVRLRDE
LSPKTRLEAS GGLKLDDARR YAETGVDYLA VGALTHSAPA LDIGMDLRST