| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10720 |
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| Symbol | |
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| ID | 8386409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1102767 |
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| End bp | 1104479 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975162 |
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| Product | hypothetical protein |
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| Protein accession | YP_003132955 |
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| Protein GI | 257055123 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.921764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTG CGTTCGACGA GCTGGGAACT CCTCTGCGTG AGGTCACGTT CGTGGTCGTC
GACCTGGAGA CCACGGGCGT CACTCCCGAC GGAGCGGGCA TCACCGAGAT CGGCGCGGTG
AAAGTCCGGG GCGGCGAGGT GGTGGGGGAA TTCGCCACCC TGGTCGACCC CGGCGTGCCG
ATCCCGCCAC AGATCGTCGC GTTGACCGGA ATCACCCCGG CCATGGTGCG TTCGGCTCCG
CGCATCGAAC AGGTGCTTCC CACGTTCCTG GAGTTCGTCT CCGGTGCGGT GCTGGTGGCC
CACAACGCGG GGTTCGACGT CTCGTTCCTC AAAGCGGCCT GCCAGACCCA CGGCTACGAG
TGGCCGAAAC CCACCGTGGT GTGCACGTTG AAACTCGCGC GGCGGGTGCT CGGGCGACAG
GAGACCCGAG GACACCGCCT GTCGACGCTG GCCTCGTTGT TCGGGGCTCG AAGCACCCCG
AAGCATCGAG CGCTCGACGA TGCCAAAGCC ACCGTCGACG TCCTGCACGG CCTGCTGGAA
CGCGTGGGCC CCCTCGGCGT GCAGTCACTG GAGGAGTTGC TCGACTACCT GCGCGCCGTC
ACCCCGGCGC AGCGTCGTAA GCGCGGTCTC GCCGCGCACC TGCCCGAACG ACCGGGTGTC
TACCTGTTCC GCGGCCCGTC CGACGAGGTG CTCTACGTCG GCACCGCACG CAATCTGCGT
CGACGGGTAC GGCAGTACTT CACCGCCTCC GACAACCGGG GTCGCATCAG GGAGATGGTG
GCCCTGGCGG AACGGGTGGA CGCCGTGGAG TGCTCCCATG CGCTGGAGGC GGCCGTGCGG
GAACTGCGGC TGTTGGCGGC CTATCGCCCT CCCTACAACC GCCGTTCCCG GAATCCGAGC
AAGGTGTGGT GGGTGGTCCT CACCGACGAA CCGTTCCCCC GACTGTCGGT GGTGCGACAG
CCCCGTGACG GTGCGCTCGG ACCGTTCACC TCCCGCAACA GTGCCAGGGC CGTGGCCGAT
ACGCTCGCCG ACCTGGCCCG GCTACGGACG TGCACCCGCC GTATCCCCGC CACAGGCGCC
GCTGGGCCGT CCTGCGTACT CGCCGAGCTG GGCAGCTGCG GAGCACCGTG CATCGGCGCC
CAGACGGCCG AGGACTACCG CCTTTCGGTG CGTCTGGTCA GCGATCTCAT CGACGGGGTG
GACACCGCAC TCCTTCGACG GGGACACGAG CAACTGGACG CGCTCTCGGC GATCCAGCAC
TTCGAACGCG CGGCTCGTCG TCGTGACGAG TTGGTCGCGG TGTTGCGCGC GGTGGACAAG
CGACACAGGC TGGCGGCATT GGCCTCCCTC GAGGAGCTCG TGGCCGCCTC TCCCGACGGT
TCGGGAGGGT GGGAGTTCGC CGTCGTGCGC TACGGCAGGT TGGCGTCCGC GGGAGTCGCG
CGCCGCGGCG TACCCCCTAT GCCCGTCGTG GACGCGCTCG TCGACTCCGC CGAGACGGTC
CTCCCCGAGC CCGGCCCGTT ACGCGGCGCG AACGGTGAGG AAACGGCGTT GCTGTGGCGC
TGGCTGACCC GGCCGGGGGT TCGGCTGGTG CGTACCTCGG CGCCGTGGGC CGAACCGGTT
CACGGGGCAG GCCGATGGCG GGCCTGGCTC GACGCCGCCG ACACGGCGAC AGCGCTGGAA
GCGATCGGCC ACGGCGACCC GGCCGCACGA TGA
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| Protein sequence | MQLAFDELGT PLREVTFVVV DLETTGVTPD GAGITEIGAV KVRGGEVVGE FATLVDPGVP
IPPQIVALTG ITPAMVRSAP RIEQVLPTFL EFVSGAVLVA HNAGFDVSFL KAACQTHGYE
WPKPTVVCTL KLARRVLGRQ ETRGHRLSTL ASLFGARSTP KHRALDDAKA TVDVLHGLLE
RVGPLGVQSL EELLDYLRAV TPAQRRKRGL AAHLPERPGV YLFRGPSDEV LYVGTARNLR
RRVRQYFTAS DNRGRIREMV ALAERVDAVE CSHALEAAVR ELRLLAAYRP PYNRRSRNPS
KVWWVVLTDE PFPRLSVVRQ PRDGALGPFT SRNSARAVAD TLADLARLRT CTRRIPATGA
AGPSCVLAEL GSCGAPCIGA QTAEDYRLSV RLVSDLIDGV DTALLRRGHE QLDALSAIQH
FERAARRRDE LVAVLRAVDK RHRLAALASL EELVAASPDG SGGWEFAVVR YGRLASAGVA
RRGVPPMPVV DALVDSAETV LPEPGPLRGA NGEETALLWR WLTRPGVRLV RTSAPWAEPV
HGAGRWRAWL DAADTATALE AIGHGDPAAR
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