| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10560 |
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| Symbol | |
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| ID | 8386393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1086660 |
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| End bp | 1087763 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975146 |
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| Product | branched chain amino acid aminotransferase |
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| Protein accession | YP_003132939 |
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| Protein GI | 257055107 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.114756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCA CGATCCCGTT TAGCCACCGT CCCAGCACTC GTCCGGCCTC GGCGGAACGG
GTAGCTGAGG TACTGGCGAA GCCGGGGTTC GGGGTGTACT TCACCGACCA CATGGTCACG
GTGACGTGGA CGGAGGAGAA GGGCTGGCAC GACGCCGAGC TTCGGGCGTA CGAGCCGCTA
CAACTGGACC CGGCCACGGC CGTGTTGCAC TACGGACAGG CGATCTTCGA GGGCTTGAAG
GCGTATCGGC AGCCGGACGG TTCCGTGAAG GCGTTCCGGC CCGACGCCAA CGCCGCCCGT
TTCCGGCGGT CGGCCCGCAG GATGGCGATG CCGGAACTGC CCGACGAGCT CTTCCTCGGC
TCGATCCGGG AACTGCTCGC CGTCGACAGC CGTTGGGTGC CGACACGGCA GGGTGACTCG
CTCTACCTGC GGCCGTTCAT GATCGCGACC GAGGTGGGGC TCGGGGTCAA CAGCCCGTCG
CGGAGCTACA TCTACACGCT CATCGCCTCT CCGGCGGGTT CGTACTTCGC CGGTGGGGTG
AAACCGGTGA GTGTGTGGTT GTCCACCGAA TACGTGCGAG CTGCGCCCGG CGGCACCGGT
GAGGCCAAGT GCGCCGGGAA CTACGCCGCC TCCTTCGTGG CGCAGGCGCA GGCGGTGGAG
CAGGGCTGCG ACCAGGTCGT CTGGCTCGAC GCCACCGAAC GCCGCTACGT CGAGGAGATG
GGCGGCATGA ACCTGTTCTT CGTCTTCGGC TCCGGCAGTG ACGCGAAGGT GGTGACGCCG
GAGCTGAGCG GCTCCCTGCT GCCCGGCGTC ACCCGGGACT CCCTGCTGCG GCTGGCCTCC
GACTTCGGCT ATCAGGTCGA GGAGCGCAAG CTGTCCACCG ACGAGTGGGA GAAGGCAGCG
GCCTCCGGTG AACTGACCGA GGTGTTCGCC TGCGGGACGG CCGCGGTGAT CACGCCCGTC
GGCCGGGTCA AGCACGCCGG GGGTGAGTTC CGCATCGCCG ATGGCCAGCC GGGTGAAGTC
ACCATGCGGT TGCGTGAGGA ACTCACCGGC ATCCAGGAAG GCACCCGTCC GGATCCGCAC
GGATGGATGC ACGCTCTGGG CTGA
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| Protein sequence | MTTTIPFSHR PSTRPASAER VAEVLAKPGF GVYFTDHMVT VTWTEEKGWH DAELRAYEPL
QLDPATAVLH YGQAIFEGLK AYRQPDGSVK AFRPDANAAR FRRSARRMAM PELPDELFLG
SIRELLAVDS RWVPTRQGDS LYLRPFMIAT EVGLGVNSPS RSYIYTLIAS PAGSYFAGGV
KPVSVWLSTE YVRAAPGGTG EAKCAGNYAA SFVAQAQAVE QGCDQVVWLD ATERRYVEEM
GGMNLFFVFG SGSDAKVVTP ELSGSLLPGV TRDSLLRLAS DFGYQVEERK LSTDEWEKAA
ASGELTEVFA CGTAAVITPV GRVKHAGGEF RIADGQPGEV TMRLREELTG IQEGTRPDPH
GWMHALG
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