| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10490 |
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| Symbol | |
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| ID | 8386386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1078742 |
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| End bp | 1080538 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644975139 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_003132932 |
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| Protein GI | 257055100 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0858003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0821905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTACT CCGTCACACT GCCGGAGCTC GGTGAGAGCG TCACCGAGGG CACCGTCACC
CGGTGGCTGA AGCAGGAGGG TGACAGGGTG GAGGTCGACG AGCCGCTGCT CGAGATCTCC
ACCGACAAGG TCGACACCGA AGTACCTTCG CCCGTGGCGG GCACGTTGCT CCGGATCGTG
GCGCGTGAGG ACGAGACCGT GGAGGTCGGC GGCGAACTCG CCGTGATCGA CGACGGTTCG
GGCGGCGAGG CCGACAGCGG TGCGACCGCT GCGGCGCCCT CCACGCCCTC CGAGCCCTCA
GCTCCTTCCG CACCGTCGGA GTCGCAGCCG GCACAGCCCG AGCCGCAGGC CGCGGCCCCG
TCGGCCCCCT CCGGCGCCGC GGCAGGCACA CCGGTGACGC TGCCGGAGCT CGGTGAGAGC
GTCACCGAGG GCACCGTCAC CCGGTGGCTG AAGCAGGTCG GCGACACGGT GGAGGTCGAC
GAGCCACTGC TGGAGATCTC CACCGACAAG GTCGACACCG AAGTACCTTC GCCCGTGGCG
GGCACGCTGC TCGAGATCAC CGTGGGTGAG GACGAGACCG TGGAGGTCGG CGCTCAGCTG
GCCGTCGTGG GGCCCGCCGG CGCCGCTCCG GCACCGCAGG CGCCCGCTGC TCAGCCTGAG
CCTGAGCCGC AGCCCGCGCC CGCCCCGCAG GCTCCGCAGG CACAGCCCGC CCCTGCTCCG
CAGCCGGCCC CACAGCCTGA GCCGCAGCCC AAGCCCGCGC CCGCCCCGCA GCCGGCTCCG
AGCGCACCTG CTCCGGCACC GCAGCAGGCT CCGGCCGCCC CGGCCGCCCC GGCCAAGCGC
GAGGGCGGGA GCACGCCGTA CGTCACGCCG CTGGTGCGCA AGCTCGCTGC CGAGCACGGC
ATCGACCTGA GCACCGTCAA GGGCACCGGT GTCGGTGGCC GCATCCGGAA GCAGGACGTG
CTGGCCGCCG CGGAGGCCAA GCAGCAGGAA GCCGCCAAGC AGCAGGCTCC GGCCGCCCCG
GCCACTCCGT CCCGGCCCGC GCCGACCGCG GTGTCGGAGT CGGAGAAGGC CGCGCTGCGT
GGCACGGTGC AGAAGGCCAG CCGCATCCGC CAGATCACGG CCGCCAAGAC CAAGGAGTCG
CTGCAGATCT CGGCCCAGCT CACGCAGGTG CACGAGGTCG ACGTCACCAA GGTCGCGCAG
CTGCGGCAGC GCGCGAAGGC GGCGTTCCGC GAGCGCGAGG GTGTGAACCT GACGTTCCTG
CCGTTCTTCG CCAAGGCCAC GGTCGAGGCG CTCAAGCAGC ACCCGAACGT CAACGCCTCC
TACAACGAGG AGACGAAGGA GATCACCTAC CACGGCTCGA TCAACCTCGG CATCGCCGTG
GACACCGAGC GTGGTCTGCT GTCGGTGGTC ATCCACGACG CGGGTGAGCT GAGCCTGTCC
GGGCTGGCCC ACCGGATCGC CGACCTGGCG GAACGCGCCC GCAACAACAA GGTGACCCCG
GACGAGCTCA CCGGCGGCAC GTTCACGATC ACCAACCTCG GCAGCAACGG CGCGCTGTTC
GACACGCCGA TCATCGTGCA GCCGCAGTCG GGCATCCTGG GCGTGGGCGC GGTCGTGCGG
CGTCCCGTCG TGGTCACCGA CGCCGAGGGC AACGACACCA TCGCGATCCG CTCGATGGCC
TACCTGCCGC TGACCTACGA CCACCGTCTC ATCGACGGTG CGGACGCGGG ACGGTTCCTC
ACGACGATCA AGCAGCGTCT GGAGGAGGGC AACTTCGAGG ACGAGCTCGG ACTCTGA
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| Protein sequence | MAYSVTLPEL GESVTEGTVT RWLKQEGDRV EVDEPLLEIS TDKVDTEVPS PVAGTLLRIV
AREDETVEVG GELAVIDDGS GGEADSGATA AAPSTPSEPS APSAPSESQP AQPEPQAAAP
SAPSGAAAGT PVTLPELGES VTEGTVTRWL KQVGDTVEVD EPLLEISTDK VDTEVPSPVA
GTLLEITVGE DETVEVGAQL AVVGPAGAAP APQAPAAQPE PEPQPAPAPQ APQAQPAPAP
QPAPQPEPQP KPAPAPQPAP SAPAPAPQQA PAAPAAPAKR EGGSTPYVTP LVRKLAAEHG
IDLSTVKGTG VGGRIRKQDV LAAAEAKQQE AAKQQAPAAP ATPSRPAPTA VSESEKAALR
GTVQKASRIR QITAAKTKES LQISAQLTQV HEVDVTKVAQ LRQRAKAAFR EREGVNLTFL
PFFAKATVEA LKQHPNVNAS YNEETKEITY HGSINLGIAV DTERGLLSVV IHDAGELSLS
GLAHRIADLA ERARNNKVTP DELTGGTFTI TNLGSNGALF DTPIIVQPQS GILGVGAVVR
RPVVVTDAEG NDTIAIRSMA YLPLTYDHRL IDGADAGRFL TTIKQRLEEG NFEDELGL
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