Gene Svir_10380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10380 
Symbol 
ID8386375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1065670 
End bp1066437 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID644975128 
Productserine/threonine protein phosphatase 
Protein accessionYP_003132921 
Protein GI257055089 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0515655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG ACCAGGCCCT CACCCTCCAC TACGCTGCGG GCTCAGATGT GGGACGACAG 
CGCGGCGGAA ACGAAGACTC CGCCTACGCG ACCGTCCGGC TGCTTGCCGT CGCCGACGGA
ATGGGCGGCC ATGCCGCAGG GGAAGTCGCC AGTGCCCAAG CCGTCGCCGC GTTGGAGGAA
CTCGACACCC GGCTTGCGGA CACGGACCTG AGCGAGGTGG ACCTGGGCGA AGAACTGGCG
GGCGCTATCG CCACCGCGGC CGACCGGCTC GAACGGAGTG TCGCCGACAA CCCCGACCTC
ACCGGTATGG GCACCACCGT CACGGCCATG TTGTGGGACT GCCCGCGATT CGCGCTCGCC
CACATCGGCG ACTCGCGCTG CTACCACCTC CGTGATGACG TCCTGACCCA GCTCACCCGT
GATCACACGA TGGTGCAGAC CCTGGTGGAC CAAGGTCGTC TCACCCCGGA TGTCGCCGAG
CGGCATCCGA GCCGCTCGGT CCTCGTGCGA GCGCTGCTCG CCGGGATCCC CGCCGAGCCG
GACGTCTCGC TGCACACGGC CGAAGCCGGC GATGTCTATC TGTTGTGCTC CGACGGTCTC
ACGGACGTCG TCAAGGTCGA CGAGATCCAC CGGGTGCTCG CGCACGTGGC GTCGAAAGAC
ACCACGTGCG ACGAGGCCGT GACCGCGCTC ATCGACCTCG CCAACGAAGG CGGTGGCCCC
GACAACATCA CCTGCGTGGT CGCCCATGTC GTGCCGGAGG GCGAGTAA
 
Protein sequence
MTHDQALTLH YAAGSDVGRQ RGGNEDSAYA TVRLLAVADG MGGHAAGEVA SAQAVAALEE 
LDTRLADTDL SEVDLGEELA GAIATAADRL ERSVADNPDL TGMGTTVTAM LWDCPRFALA
HIGDSRCYHL RDDVLTQLTR DHTMVQTLVD QGRLTPDVAE RHPSRSVLVR ALLAGIPAEP
DVSLHTAEAG DVYLLCSDGL TDVVKVDEIH RVLAHVASKD TTCDEAVTAL IDLANEGGGP
DNITCVVAHV VPEGE