| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10230 |
|---|
| Symbol | |
|---|
| ID | 8386360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1050501 |
|---|
| End bp | 1051028 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975113 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003132907 |
|---|
| Protein GI | 257055075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.837765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCAGGT TCGCGGCAAT TCACACGCTG GACGACATCA CAGGGGAGCC GGCGCGGGAA
ACTGTGTTCT TCGCTCTCGA CGGTGTCGAA TACAAGATCG ACCTCACGGC CGAGCACGCA
GACGATCTCC GCTCCATCCT CACCCGTTAC ATCGAGCACG CGCGCCGTAC CGGTGGACGT
AAGCAGGCCC GTCGCCTGAT CGACGGCCCG ACGCCGATCT CGTCCCCTCC GGCGCGGTTC
GCCCCCCGGC CCACCACCCG GAGGAAGCGT TCCTCCGCCG CGGCGACCAC GGCGGCGACC
ACGGTGGTGG AGACCGTGGA ATCCGCCAAG GAATCCGCCA AGACGAGCAG AGGATCGGCC
AGGACGAAGG CGAAGACCGG TCGCCAGACT CGCACCAACC GACGTACGAA GAACGCGTCG
GTCACCGACT CGGCGCCGAC CACACCCGCA CCGAAGCCGG CCAAGCGCGT GTCTCCTCCC
GCAAGGGCGG CCGTGCCCCA GGTGACCTTC TCGGCCCCCG AGAGCTGA
|
|---|
| Protein sequence | MARFAAIHTL DDITGEPARE TVFFALDGVE YKIDLTAEHA DDLRSILTRY IEHARRTGGR
KQARRLIDGP TPISSPPARF APRPTTRRKR SSAAATTAAT TVVETVESAK ESAKTSRGSA
RTKAKTGRQT RTNRRTKNAS VTDSAPTTPA PKPAKRVSPP ARAAVPQVTF SAPES
|
|---|
| |