| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10150 |
|---|
| Symbol | |
|---|
| ID | 8386352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1043336 |
|---|
| End bp | 1044085 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003132899 |
|---|
| Protein GI | 257055067 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.604696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGTGT TGTTGCCTCC TTCCGAGACC AAGGCCCACG GCGGCGACGG CCCTCCTCTC
GACCTCGACG CCCTGTCGTT TCCGGAGCTG AACCCGATCC GGCGCAAGCT GGCCGACGCA
CTCGTGGAAC TCGCCGCCGA CGTACCTGCC AGCCTCGCGG CCTTGGGGTT GTCGGAACGG
CAACGCGCCG AGGTCGAACG CAACGCCCTC CTGCACTCGT CGCCGACCAT CCCGGCACTC
CTGCGCTACA CCGGCGTGCT CTACGACGCC CTCGGTGCCT CCACTTTCAC CGGAGTGGAA
CGCGAGCGGG CCCGTCGTCG GCTCGCTGTG GCCTCCGCCC TGTTCGGTGT GGTGCGGGCG
GGGGACCCGA TCCCGGCCTA TCGGTTGTCA GGCAACTCGA CAATGCCCGG CCTCGGTTCA
CTGCGGCCAC TGTGGCGGCC CGCGCTCGAA CCCCTCCTGG CCGACATCAG CGCCGACGAA
CTGGTGGTGG ACCTGCGTTC GGGGGTTTAT GCGAACCTCG CCCGCGTCCC GGAAGCGACC
ACCGTCCGCG TCGTCACCGA GGACTCCTCG GGCCGCAGGA AGACGGTCAG CCACCACAAC
AAGGCCCACA AGGGCCGACT CGCCGCCGCG CTGGCCACCT GTGCGACGGA ACCCACTCGT
ACCGAGGACG TCGTCGCGGT CGCCAGAGCC GCCGGGCTCG ACTGCGAACA GACCGGAAAG
ACCTCGGTGG AGATCGTCAC CCGCTCGTGA
|
|---|
| Protein sequence | MLVLLPPSET KAHGGDGPPL DLDALSFPEL NPIRRKLADA LVELAADVPA SLAALGLSER
QRAEVERNAL LHSSPTIPAL LRYTGVLYDA LGASTFTGVE RERARRRLAV ASALFGVVRA
GDPIPAYRLS GNSTMPGLGS LRPLWRPALE PLLADISADE LVVDLRSGVY ANLARVPEAT
TVRVVTEDSS GRRKTVSHHN KAHKGRLAAA LATCATEPTR TEDVVAVARA AGLDCEQTGK
TSVEIVTRS
|
|---|
| |