Gene Svir_10100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10100 
Symbol 
ID8386347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1038136 
End bp1038588 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID644975100 
Productpredicted acyltransferase 
Protein accessionYP_003132894 
Protein GI257055062 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.374622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.768267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGACGG AGCAGGACGA GATCACGATC GTCTCCCGCG CGGCTTCCGA ATTGACCCCC 
GCGGAGCTGT ACGCCTTACT GCGGTTGCGT GTGGACGTGT TCGTGGTCGA GCAGGAGTGC
CCGTATCCGG AACTCGACGG TAGGGACCTG GACGCCGACA CTCGGCACGT GTGGGCCACC
TCCTCCGACG GACGGATCGT CGGATGTCTG CGTGTCTTAC GTGAGGACGA CGGTGTGCTG
CGGATCGGGC GGGTGTGCAC GGCCGATTTC GCGAGGGGAA CGGGTCTCGG TGGTCGTCTG
ATGCGGACGG CGATGGAGCT GGTCGGAGAC TCGGAATGCG TACTGGACGC CCAGACCTAC
GCCACCGGTT TCTACGCCAA GTTCGGTTTC GAACCCGAGG GTGAGGTGTT CCTGGAGGAC
GGGATCCCGC ACATCACCAT GCGCAGGCGC TGA
 
Protein sequence
MGTEQDEITI VSRAASELTP AELYALLRLR VDVFVVEQEC PYPELDGRDL DADTRHVWAT 
SSDGRIVGCL RVLREDDGVL RIGRVCTADF ARGTGLGGRL MRTAMELVGD SECVLDAQTY
ATGFYAKFGF EPEGEVFLED GIPHITMRRR