| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10050 |
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| Symbol | |
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| ID | 8386342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1031619 |
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| End bp | 1033478 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975095 |
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| Product | transcriptional regulator, CdaR family |
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| Protein accession | YP_003132889 |
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| Protein GI | 257055057 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.626795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA CAGGTTCCGA GCATGAGGCC GAGGGCGAAG CGGCCGCTCG GCGATTGCTG
GAGCTGCTGT CCGCGGGCGC AAGCAGCGAG GAGCTCGCGC GGGTGCCCGC GGACAGCGCC
ACCAGGCAGC TGGCCATGCA CATCCGTCGC ACGCTCGACG CCCACAGTCG GCGAGAGGCG
GAGCTGACCG CGTTGTTCGA CACGGCGAGC GACCTGGCCA GGCTGCGGGA CCTGGACGCG
GTGCTGCGTT CGATCGTGCG CCGGGCCCGC ATGTTGCTCC GGGCGGACGT CTCCTACCTC
ACCCTCAACG ACCACTCCGA CGACGGAAGC ACGTACATGC GGGTCACGGA CGGCTCGGCG
TCCGCGATAT TCCAGCAGCT CCGTCTCGGC GCCGGGGAAG GTCTCGGTGG ACTGGTGGCA
CAGACGAAAC GCCCCTATGC CACCCGCGAC TACCCCAACG ACGAACGATT CGTCCACACC
GGACCGATCG ACCGGGCGGT GAACGACGAG GGCCTCATCG CCATCCTCGG GGTTCCGCTG
TCCCTGGGGG AACGGGTGAT CGGGGTGCTG TTCGCCTCGG AACGGCGACC TCGGTCGTTC
TCCCCCGACG AGGTGGCGTT GTTGTCGTCG TTCGCCGACC ATGCCGCCAT CGCCATCGAC
AACGCACGGT TGATCGAGGA GAGCGCGGCC GCGTTGGCGG AGTTGGGTGC CGCCAACGCG
ACGATCAAGG CCCATCACGA AAGCCTCGCT CGAGCCCAGG AGGCCCACGA CCGTCTCACC
GAACTGGTGC TCGGCGGTGC GGACGTGGCT GAGGTGGCGG AGGCGGTCGC GTCGATGCTC
GGTGGCGACA TCGTGGTGCG CGACGCCGAG GCCACGGAAC TGGGACGGTC CGGTGCCGCC
CGGCCACGGA TGTCGGCGCG GGCGTTGAAC CGAGCGCTTT CCGCGTCCCG GTCGGCGGGG
AAGGCCATCG CAGAGGGGGA CGCGTGGGTC TGTGCGGTGA TGGCGGGTCC CGAACTGTTG
GGCAGCATCA CGCTCACCGG CCGTCCCGAT CTCGACGACG CGGACCGGCG TCTGTTCGAA
CGGGCCAGTG TGGTGACGGC GTTGCTGTTG CTGTTGCGGC GATCGGCCGC CGAGGCCGAG
GACAAGGTCC GGGGCGAGTT GATGGCCGAC CTGTTGAACG CGCCCGAACG GGACCCGGCG
ACCCTGCTCG ACCGGGGGCG CAGGCTCGGG GTGGACCTCA CCGCGCCGCA TGTCGTGCTC
ACCTTGCACG CCGACGGTGT GTCTCGGGCG CGGTTGGCGT CGTTGGCCGC GCGCAGGGCC
GTGCTGGCGG GGGTGTACTC GGAGCAGGTG GTGATGCTGG CCGAGGCCAC GGACCCCGGT
GAGCTGGCCC GCAAGACCGC CGCCGAACTC AAGGCGTTGC TGGGGTGTCC GGTGACCGTC
GGAGCGGTCG GGCCCGCAGC CGGCCCCGCG GATCTGGCGA AGGCCTACGA GGAGTCGGTG
CGCTGCGTGC GCGCCCTGCT CGCCCTGGGG CGGGCAGGAC ACGGCGCGGC ACCACCCGAT
TTGGGTTTCG TGGGCCTGGT GTTGAGTGAC CGCACCGATG TCGCGTCGTT CGTGCGGAAC
ACACTCGGGC CGGTGCTGGA CTACGACGCC GCGCGGGGAA CGGAGTTACT GCGTACGTTG
CGCGCGTATT TCGCGTGTGG GGGCAATCTC ACGCGCGCCA AGGACGAACT GCACGTCCAC
GTCAACACGG TGGCGCAGCG GCTCGACCGC ATCGCGTCGT TGCTGGGGGC CGACTGGCAA
CAGCCGGATC GGGCACTGGA ACTCCAGCTG GCACTGCGCC TGCACACGCT GTCCGGCTGA
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| Protein sequence | MIETGSEHEA EGEAAARRLL ELLSAGASSE ELARVPADSA TRQLAMHIRR TLDAHSRREA
ELTALFDTAS DLARLRDLDA VLRSIVRRAR MLLRADVSYL TLNDHSDDGS TYMRVTDGSA
SAIFQQLRLG AGEGLGGLVA QTKRPYATRD YPNDERFVHT GPIDRAVNDE GLIAILGVPL
SLGERVIGVL FASERRPRSF SPDEVALLSS FADHAAIAID NARLIEESAA ALAELGAANA
TIKAHHESLA RAQEAHDRLT ELVLGGADVA EVAEAVASML GGDIVVRDAE ATELGRSGAA
RPRMSARALN RALSASRSAG KAIAEGDAWV CAVMAGPELL GSITLTGRPD LDDADRRLFE
RASVVTALLL LLRRSAAEAE DKVRGELMAD LLNAPERDPA TLLDRGRRLG VDLTAPHVVL
TLHADGVSRA RLASLAARRA VLAGVYSEQV VMLAEATDPG ELARKTAAEL KALLGCPVTV
GAVGPAAGPA DLAKAYEESV RCVRALLALG RAGHGAAPPD LGFVGLVLSD RTDVASFVRN
TLGPVLDYDA ARGTELLRTL RAYFACGGNL TRAKDELHVH VNTVAQRLDR IASLLGADWQ
QPDRALELQL ALRLHTLSG
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