| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10000 |
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| Symbol | ispG |
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| ID | 8386337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1026036 |
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| End bp | 1027187 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975090 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003132884 |
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| Protein GI | 257055052 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.169212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCG ATCTGGGTTT GCCCACCGCT CCTCCCCCTG TTCTCTCCGA ACGGCGTAAG
ACGCGACAGC TCCAGGTGGG CTCCGTCGGG GTCGGCAGCG ACCACCCGAT CTCCGTGCAG
TCCATGACCA CCACGGTGAC CGCCGATGTC AACGCCACGC TGCAGCAGAT CGCCGAGTTG
ACGGCCGCGG GATGCGACAT CGTGCGAGTG GCCTGCCCCA GCGCCGACGA CGCGGAGGCA
TTGCCGGCCA TCGCGGCGAA GTCGAAGATC CCGGTGATCG CCGACATCCA CTTCCAGCCG
AAGTACGTGT TCGCCGCCAT CGAGGCCGGA TGTGCGGGGG TGCGTGTCAA CCCCGGAAAC
ATCAAGAAGT TCGACGACAA GGTCGGCGAG ATCGCGCAGG CGGCGAAGGA CCACGGCACG
CCCATCCGGA TCGGGGTCAA CGCGGGTTCG CTCGATCCCC GGATCATGGC CAAGCACGGT
AAGGCCACCC CGGAGGCGCT GGCCGAATCG GCACTGTGGG AGGCGTCGCT GTTCGCCGAG
CACGACTTCC ACGACCTGAA GATCTCGGTG AAGCATCACG ACCCGGTCGT GATGGTGCGG
GCCTACGAGA TCCTCGCCGA GGAATGCGAC TACCCGCTGC ACCTCGGCGT GACCGAGGCG
GGTCCGGCGT TCCAGGGCAC CATCAAGTCG GCCGTGGCGT TCGGCGCGCT GTTGCGGCAG
GGCATCGGCG ACACCATTCG CGTGTCGTTG TCGGCGCCTC CGATCGAGGA GGTGAAGGTC
GGCCACCAGA TCCTGCAGTC GCTGAACCTC CGTCCACGCA AGTTGGAGAT CGTCTCCTGC
CCGTCGTGCG GCAGGGCACA GGTGGACGTC TACAAACTGG CCGACGAGGT CACGGCGGGC
TTGCAAGGGC TGGAAGTGCC GTTGCGGGTC GCGGTGATGG GATGCGTCGT GAACGGCCCG
GGCGAGGCGC GGGAGGCCGA CCTCGGGGTG GCGTCCGGCA ACGGCAAGGG ACAGATCTTC
GTGAAGGGGA AGGTCATCAA GACCGTCCCC GAACACCAGA TCGTCGAGAC CCTCATCACC
GAGGCCCTGC GCATCGCCGA GGAGAACGGC TACACCGAAG GCGACGGGGA ACCCATCGTC
ACGGTGAGCT GA
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| Protein sequence | MTVDLGLPTA PPPVLSERRK TRQLQVGSVG VGSDHPISVQ SMTTTVTADV NATLQQIAEL
TAAGCDIVRV ACPSADDAEA LPAIAAKSKI PVIADIHFQP KYVFAAIEAG CAGVRVNPGN
IKKFDDKVGE IAQAAKDHGT PIRIGVNAGS LDPRIMAKHG KATPEALAES ALWEASLFAE
HDFHDLKISV KHHDPVVMVR AYEILAEECD YPLHLGVTEA GPAFQGTIKS AVAFGALLRQ
GIGDTIRVSL SAPPIEEVKV GHQILQSLNL RPRKLEIVSC PSCGRAQVDV YKLADEVTAG
LQGLEVPLRV AVMGCVVNGP GEAREADLGV ASGNGKGQIF VKGKVIKTVP EHQIVETLIT
EALRIAEENG YTEGDGEPIV TVS
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