| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09990 |
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| Symbol | |
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| ID | 8386336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1024716 |
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| End bp | 1025924 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975089 |
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| Product | predicted membrane-associated Zn-dependent protease |
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| Protein accession | YP_003132883 |
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| Protein GI | 257055051 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.417947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGTCT ACATCCTGGG GGTCGTGCTC TTCGCGCTCG GCATCTGCGT CTCCGTCGCG
TTGCATGAGG CCGGGCACAT GGTTGCGGCC AAGTCCTTCG GTATGAAGGT GCGGCGCTAC
TTCGTGGGCT TCGGGCCGAC GGTGTTCTCA TTCCGCAGGG GTGAGACCGA GTACGGCCTG
AAGTGGCTTC CACTGGGTGG CTTCTGTGAC ATCGCGGGGA TGACCGCGCT CGACGAGGTG
ACCCCCGACG AGGCCTCACG CGCGATGTGG CGGTTCAAGA CCTGGAAACG CACCGTGGTG
CTGGCGGCCG GGTCGTTCAC GCACTTCGTG TTCGGCTTCA TCGTGCTCTA CCTCATGGCG
GTCACGATGG GACTGCCGAA CCTCGCCGCC AAGCCGGTCA TCAACACGGT CTCCGACTGT
GTGCGCAGTG CCACGACGGC GGAGGAGTGG AACGATCCGA CCTGTCGACC GGGTGATCCG
GCTCCCGCCA AGTCGGCGGG GCTGCGGCCG GGCGACGAGG TGACGGCGAT CGACGGCACC
CCCGTCGAGA CGTGGCCTGA GTTGCTCAGC GCCGTGCAGA GTTCCTCGGG TCCCACGGAG
TTCCGCATCC TGCGGGACGG TGAGCCGCTG ACCCTCATCG TCGACGTGCC ACGGGTGGAG
CGACCCGACG GCGAGGGCGG CACCGAGCGG GTGGGGGCGA TCGGTGCCTC GCAGGCGGGG
ATGCTGACCT ACGGTCCGGT GGAGGCGATC GGCGGTTCCG CCGCGTTCAC CGGTGATCTG
CTGGTGATGA CCTGGGAACG GCTGCTCGAG TTCCCGGAGA AGATCCCGGC CGTGATCGAG
GCCATCCTCG GGGAGGAACG TGACCCGGAG ACGCCCGTGA GTGTGGTCGG GGCCAGCCGG
ATCGGTGGTG AGGCCGTGGA GCACGGCTTG TGGGAGGTGT TCTTCCTCCT GCTGGCCAGC
CTGAACTTCT TCGTCGGCAT CTTCAACCTG CTGCCACTGC TACCGCTCGA CGGCGGGCAC
ATCGCCGTGA CCTGGTACGA ACGGGTGCGC GACTGGATCC GCAAACTGCG CGGTAAGGCG
GCCGGAGGAC CCGTCGACTA CACCAAGCTC AACGCGGTCA CGACCGTGTT CGTGCTCATC
GGTGGTGCCA TTGTGTTGCT CACCGTGACG GCCGACATCG TGAATCCCAT CCGACTCGTC
CCACAGTAG
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| Protein sequence | MLVYILGVVL FALGICVSVA LHEAGHMVAA KSFGMKVRRY FVGFGPTVFS FRRGETEYGL
KWLPLGGFCD IAGMTALDEV TPDEASRAMW RFKTWKRTVV LAAGSFTHFV FGFIVLYLMA
VTMGLPNLAA KPVINTVSDC VRSATTAEEW NDPTCRPGDP APAKSAGLRP GDEVTAIDGT
PVETWPELLS AVQSSSGPTE FRILRDGEPL TLIVDVPRVE RPDGEGGTER VGAIGASQAG
MLTYGPVEAI GGSAAFTGDL LVMTWERLLE FPEKIPAVIE AILGEERDPE TPVSVVGASR
IGGEAVEHGL WEVFFLLLAS LNFFVGIFNL LPLLPLDGGH IAVTWYERVR DWIRKLRGKA
AGGPVDYTKL NAVTTVFVLI GGAIVLLTVT ADIVNPIRLV PQ
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