| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09830 |
|---|
| Symbol | |
|---|
| ID | 8386320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1009780 |
|---|
| End bp | 1010157 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644975073 |
|---|
| Product | conserved hypothetical protein TIGR00252 |
|---|
| Protein accession | YP_003132867 |
|---|
| Protein GI | 257055035 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
|---|
| TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.351272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCC CGGATGAGAA GGGGGAATCG CGAGTCGCTC TGGGACGACG TGGTGAGGAC
CTGGCCGTCG AGCATCTCCG GCGACAGGGC CTGGTGATCC TGGAACGTAA CTGGCGGTGT
CGCGAGGGAG AGCTGGACAT CCTCGCCACC GACGGCCGGA CACTCGTCGT GTGTGAGGTG
AAGACCCGGT CCGGGCGTGG TTACGGGATT CCGACGGAAG CCGTCACCCA GGACAAGCGC
AACCGCATCC GCAGGTTGAC CTTGCGCTGG TTGGCGAGTC GACGGGTGGC ATGGTGCCCG
TTGCGTTTCG ACGTGATCGC CATCGAGTGC TCTCCGAAAG AGCCACCGCG GCTCCGGCAT
GTCGTGGGGG CGTTCTGA
|
|---|
| Protein sequence | MSVPDEKGES RVALGRRGED LAVEHLRRQG LVILERNWRC REGELDILAT DGRTLVVCEV
KTRSGRGYGI PTEAVTQDKR NRIRRLTLRW LASRRVAWCP LRFDVIAIEC SPKEPPRLRH
VVGAF
|
|---|
| |