Gene Svir_09760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09760 
Symbol 
ID8386313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1005140 
End bp1005379 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content67% 
IMG OID644975066 
Producthypothetical protein 
Protein accessionYP_003132860 
Protein GI257055028 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0801933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTTC TCGCCGATTC CCTCGAACAC CTGGTGCGCG GCATCGTCGA CAACCCCGAT 
GACGTGCAGG TGGAGTTGAT CACCACTCGT CGGGGTCGGA CCCTGGAGGT GCATGTGCAC
CCCGACGACC TCGGCAAGGT GATCGGCCGG GGTGGCCGTA CGGCCACCGC TCTGCGCACC
GTGATGGGAG CTGTCGGCGG TCGCGGCGTC CGGGTGGACG TCGTCGACAC TGACCGATAG
 
Protein sequence
MSFLADSLEH LVRGIVDNPD DVQVELITTR RGRTLEVHVH PDDLGKVIGR GGRTATALRT 
VMGAVGGRGV RVDVVDTDR