Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09750 |
Symbol | |
ID | 8386312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1004652 |
End bp | 1005143 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644975065 |
Product | SSU ribosomal protein S16P |
Protein accession | YP_003132859 |
Protein GI | 257055027 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.178453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTCA AGATCAAGTT GCAGCGCCTC GGCAAGATTC GTGCGCCCTA CTACCGCATT GTGGTCGCGG ACGCCCGCAC CCGTCGTGCC GGCAGGGCCA TCGAGACCAT CGGCAAGTAC CACCCGAAGA ACGAGCCCAG CTACATCGAG GTGGACTCGG AGCGTGCTCA GTACTGGCTG AAGGTTGGCG CTCAACCTAC GGAGCCCGTG CAGCGCATCC TGGAGATCAC CGGCGACTGG CAGAAGTTCA AGGGGCTGCC CGGTGCTGAG GGCAAGCTCC GTCACCCGGA GCCCAAGCCC TCGAAGGAGG AGCTGTTCAA CGCCGCGCTG GCCGCTGCCA ACGAGGAGCC TGCGGTCGAG GCCACCACGC CCAAGAAGAA GGGCGGCAAG AAGGCCGACA AGGCCGACAA GGGTGAGAAG GCCGACAAGA CCGAGAAGTC GGAGAAGGCC GAGTCCGGTG ACTCGGCGGA GAAGAAGGCC GACGAGGCGT GA
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Protein sequence | MAVKIKLQRL GKIRAPYYRI VVADARTRRA GRAIETIGKY HPKNEPSYIE VDSERAQYWL KVGAQPTEPV QRILEITGDW QKFKGLPGAE GKLRHPEPKP SKEELFNAAL AAANEEPAVE ATTPKKKGGK KADKADKGEK ADKTEKSEKA ESGDSAEKKA DEA
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