Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09730 |
Symbol | |
ID | 8386310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1002773 |
End bp | 1003528 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975063 |
Product | CAAX amino terminal protease family |
Protein accession | YP_003132857 |
Protein GI | 257055025 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.648802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGGTGG AGCACGACGA GGGCTCGCCG GCTGACGAGG GCTCGCCGTC GATTCGAGAC GGCCTCGTTC TCGGCGCACA TTGGGGACTG CTCGCCTTCA TCATCTCCCT CAGCCTCTAT TACCTGTTGT CATTGCTGCT GACGGGACTG GTGTTCGGCG GCCTCGTGAG CACGTGGGAT CCGTCCGACC TCGGTCCTTT GGTCCTGTTG GCGTTTTTGC CCAATCTGCT CCTCGGACTC GGTCCGGTGT ACGCCTCGCG GAAGTGGGGC AGCGGCATGC GCGGCGACTT CGGGTTGCTG CCCACCGGTC GGGACGTGCG GGTCGGACTG GCGTGCGGCG GGTTCTCCCT GCTCACGGCG TATCTGTTGA ACCTGCTGCT GCTCCAGGTC TACGGCAGCG AGTACCTGTC CGATTCGGCC ACGAACGTGC TGCAGAACCT GATGTCCGGG ATCGGATGGC TCATCCTCGC CGCGATCGTG GTGGTCGTGG TCGCGCCGCT GACCGAGGAA CTGCTGTTCC GCGGGGCGTT GTGGGGTGGA CTGGCGTATT ACCGGGTGCC GCCCTGGGTG ATCCTCGTGC TCACGGCGCT CGTGTTCGCC CAGGTGCACG GGGAACCGTC CCGCATGCTC GCGCTGTTCG GGCAGGGCAT CGCCATCGGC GCGGCCCGGA TGATCACCGG GAGGGTGAGC GCGAGCATCG TCGCCCACGC CACCAACAAC CTCCCACCTG CGTTGTTGCT CCTCAGCGGA GCATGA
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Protein sequence | MWVEHDEGSP ADEGSPSIRD GLVLGAHWGL LAFIISLSLY YLLSLLLTGL VFGGLVSTWD PSDLGPLVLL AFLPNLLLGL GPVYASRKWG SGMRGDFGLL PTGRDVRVGL ACGGFSLLTA YLLNLLLLQV YGSEYLSDSA TNVLQNLMSG IGWLILAAIV VVVVAPLTEE LLFRGALWGG LAYYRVPPWV ILVLTALVFA QVHGEPSRML ALFGQGIAIG AARMITGRVS ASIVAHATNN LPPALLLLSG A
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