Gene Svir_09730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09730 
Symbol 
ID8386310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1002773 
End bp1003528 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID644975063 
ProductCAAX amino terminal protease family 
Protein accessionYP_003132857 
Protein GI257055025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.648802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGGTGG AGCACGACGA GGGCTCGCCG GCTGACGAGG GCTCGCCGTC GATTCGAGAC 
GGCCTCGTTC TCGGCGCACA TTGGGGACTG CTCGCCTTCA TCATCTCCCT CAGCCTCTAT
TACCTGTTGT CATTGCTGCT GACGGGACTG GTGTTCGGCG GCCTCGTGAG CACGTGGGAT
CCGTCCGACC TCGGTCCTTT GGTCCTGTTG GCGTTTTTGC CCAATCTGCT CCTCGGACTC
GGTCCGGTGT ACGCCTCGCG GAAGTGGGGC AGCGGCATGC GCGGCGACTT CGGGTTGCTG
CCCACCGGTC GGGACGTGCG GGTCGGACTG GCGTGCGGCG GGTTCTCCCT GCTCACGGCG
TATCTGTTGA ACCTGCTGCT GCTCCAGGTC TACGGCAGCG AGTACCTGTC CGATTCGGCC
ACGAACGTGC TGCAGAACCT GATGTCCGGG ATCGGATGGC TCATCCTCGC CGCGATCGTG
GTGGTCGTGG TCGCGCCGCT GACCGAGGAA CTGCTGTTCC GCGGGGCGTT GTGGGGTGGA
CTGGCGTATT ACCGGGTGCC GCCCTGGGTG ATCCTCGTGC TCACGGCGCT CGTGTTCGCC
CAGGTGCACG GGGAACCGTC CCGCATGCTC GCGCTGTTCG GGCAGGGCAT CGCCATCGGC
GCGGCCCGGA TGATCACCGG GAGGGTGAGC GCGAGCATCG TCGCCCACGC CACCAACAAC
CTCCCACCTG CGTTGTTGCT CCTCAGCGGA GCATGA
 
Protein sequence
MWVEHDEGSP ADEGSPSIRD GLVLGAHWGL LAFIISLSLY YLLSLLLTGL VFGGLVSTWD 
PSDLGPLVLL AFLPNLLLGL GPVYASRKWG SGMRGDFGLL PTGRDVRVGL ACGGFSLLTA
YLLNLLLLQV YGSEYLSDSA TNVLQNLMSG IGWLILAAIV VVVVAPLTEE LLFRGALWGG
LAYYRVPPWV ILVLTALVFA QVHGEPSRML ALFGQGIAIG AARMITGRVS ASIVAHATNN
LPPALLLLSG A