| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09710 |
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| Symbol | |
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| ID | 8386308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1000083 |
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| End bp | 1001630 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975061 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_003132855 |
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| Protein GI | 257055023 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.955104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCCCG TGTTCGACAC ACTCTCCGAT CGGCTCACGT CGGTCCTGCA GAACCTGCGC
GGCAAAGGGA AGCTCTCGGA CGCCGACATC GACGCGACGG CGCGCGAGAT CCGCATCGCC
TTGCTGGAAG CGGACGTCGC GTTGCCGGTG GTGCGCGAGT TCATCAAGCA CGTCAAGGAG
CGGGCCAAGG GCGCGGAGGT TTCGCAGGCC CTCAACCCGG CCCAGCAGGT CATCAAGATC
GTCAATGAGG AGCTCATCGC CATCCTCGGT GGCGAGACCC GCAGATTGAA CCTCGCCAAG
ACCCCGCCTT CCGTGATCAT GCTGGCGGGT CTGCAGGGGT CCGGTAAGAC CACGCTGGCG
GGCAAGCTCG CGCGATGGCT GAAGAAGCAG GGACACACGC CGCTGCTCGT GGCGTGTGAC
CTCCAGCGGC CGAACGCGGT CACTCAGTTG CAGGTCGTCG GCGAGCGGGC GGGGGTGACC
ACGTTCGCTC CCGAACCGGG CAACGGGGTC GGCGATCCGG TGGACGTCGC CCATCGGTCG
ATCGAGGAGG CGCGCCGGGC CCAGCACGAC GTGGTCATCG TCGACACGGC CGGTCGGCTC
GGTGTCGACG AGGAGATGAT GCGGCAGGCC GCCGACATCC GCGATGCCAT CTCGCCCGAC
GAGACCCTGT TCGTCGTGGA CGCCATGATC GGTCAGGACG CCGTGACCAC GGCGGAGGCG
TTCCGCGACG GTGTCGGCTT CACCGGCGTG GTGCTCACGA AGTTGGACGG TGACGCCCGC
GGTGGTGCGG CCCTGTCGGT GCGGCACGTG ACGGGCAAGC CGATCCTGTT CGCCTCCAAC
GGCGAGAAGT TGGAGGACTT CGACGTCTTC CACCCGGACC GGATGGCCAG CCGCATCCTC
GGCATGGGCG ACGTGCTCAC CCTGATCGAG CAGGCCGAGC AGGCGTTCGA CCAGGAGAAG
GCCGAGGAGG CCGCGGCCAA ACTCGGCACC GGTGAGCTCA CCCTGGAGGA CTTCCTGGAG
CAGATGCAGG CCGTCCGGCG TATGGGACCG ATCGGCAACC TGCTCAGCAT GCTGCCCGGT
GCGGGCCAGA TGAAGGAGCA ACTCGCCCAG GTCGACGACT CCCAGCTCGA CCGCCTGCAG
GCCATCATCC GCGGTATGAC CCCGGCCGAG CGCGCCAACC CGAAGATCAT CAACGCGTCC
CGCCGGCAAC GTATCGCCAA GGGTTCCGGT GTGACCGTGC GCGAGGTCAA CGATCTGGTG
AACCGGTTCT TCGAGGCCCG CAAGATGATG CAGCAGATGG CGGGCCGGTT CGGGTTCGGC
GCGGGGGTCA GTGCCACGAA GAAACGCAAG GGCAAGAAGG GGAAGAAGGG CAAGCACAAG
GGACCCACGC CGCCCAAGGT CAAGGGCGGT TTCCCCGGCG GCTTCCCCGG CGGGTTCCCG
CAAGGGGGCG GCATGCCCGA TCTGTCCCAG CTCGGGGGCG GGTTGAACGA ACTGCCGCCC
GGTTTCGATC CGTCGAAGCT GAACCTGCCG AAGAAAAAGA AGAAGTAG
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| Protein sequence | MHPVFDTLSD RLTSVLQNLR GKGKLSDADI DATAREIRIA LLEADVALPV VREFIKHVKE
RAKGAEVSQA LNPAQQVIKI VNEELIAILG GETRRLNLAK TPPSVIMLAG LQGSGKTTLA
GKLARWLKKQ GHTPLLVACD LQRPNAVTQL QVVGERAGVT TFAPEPGNGV GDPVDVAHRS
IEEARRAQHD VVIVDTAGRL GVDEEMMRQA ADIRDAISPD ETLFVVDAMI GQDAVTTAEA
FRDGVGFTGV VLTKLDGDAR GGAALSVRHV TGKPILFASN GEKLEDFDVF HPDRMASRIL
GMGDVLTLIE QAEQAFDQEK AEEAAAKLGT GELTLEDFLE QMQAVRRMGP IGNLLSMLPG
AGQMKEQLAQ VDDSQLDRLQ AIIRGMTPAE RANPKIINAS RRQRIAKGSG VTVREVNDLV
NRFFEARKMM QQMAGRFGFG AGVSATKKRK GKKGKKGKHK GPTPPKVKGG FPGGFPGGFP
QGGGMPDLSQ LGGGLNELPP GFDPSKLNLP KKKKK
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