Gene Svir_09600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09600 
SymbolanmK 
ID8386297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp988264 
End bp989469 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID644975050 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_003132844 
Protein GI257055012 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.214193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.399313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGAAA GCAAGTCCGA GTTTCGAGTC GTCGGATTGC TGTCCGGCAC GTCGGTGGAC 
GGCATCGACG TGGCCGTGGC CGCGTTCCAC GCCGACGAAG ACGAACTCAC CCTGACCCCG
CTCGGTTACC GCGAGCTTGA CTACCCCGAG CAACTACGGC GCGACATCCT CGCCGCCCTC
CCGCCCGCAG GCTGCAGCGC GGAGCAGCTC ACCAAACTCG ACACCCGTAT CGGGCAGGCG
TTCGCCGATG CCGCCGCCAC CGTCATCGAC GAGATAGCGG ACGGCCGCGC CGACCTCGTC
GCCTCCCTCG GCCAGACCGT GTTCCACTGG GTCGAGGAAG GCAGGGTCGA GGGAACGCTC
CAGCTCGGCC AGCCCGCGTG GATCGCCGAA CGCACCGGAC TACCCGTCGT GGCGGATCTG
CGGGTGCGGG ACGTCGCCGC GGGCGGGCAC GGCGCCCCGC TGGCGAGCAC ACTCGACGCC
CTGTGGCTGC GCGCCGAAGC GGAACGGGAG GGCAAGCCCG TCGCCGCTCT CAACATCGGC
GGCATCGCCA ACCTCACCGT GGTGCGCCCC GACGGCTCGG TACTGGCCTA TGACACCGGT
CCCGGCAACG CGCTGTTGGA CATCGCCGCC GCCGAGGTGA CCGGCGGCGC GCAACACAGC
GACGTCGACG GCGCGCTCGC GGCACGCGGG ACGGTACGCG ACGACCTCCT ATCGCGATTG
CTGGCCGATC CGTACTATTC CCAGGTCCCC CCGAAGTCGA CCGGCAAGGA GTATTTCCAC
GCCGCCTATC TCCGTCAGGC CGTCGAGGGA CTGCCGGAGA TCGACGGCCC CGACCTGCTC
GCCACGCTCA CCGAGCTCAC GGCGGCGACG GTGGCGGCCG AATGCGAGCG CCACGGCGTC
AGCACCGTCG TGGCCTCCGG CGGCGGACTG CGTAATCCCG CCCTCATGAC AGCGTTGGGT
GCCCGGGTCA CCGTGGTGCC CAGTGACGAC AAAGGTCTGC CCTCCGACGG CAAGGAGGCC
TACCTCACCG CGCTGCTCGG CTGGCTGACC TGGAACGGAC TGCCCGCCAA CGTGCCCAGT
GCGACCGGCG CCGCCGGCGC GCGCCTGCTC GGCGCCATCA CCCCGGGGGC GGGTCCGTTA
CTGCCGCCCA CACCACACCC CCGACCCGTG ACCCGACTCC GGGTCACACC CCCCGACACA
CCGTAG
 
Protein sequence
MVESKSEFRV VGLLSGTSVD GIDVAVAAFH ADEDELTLTP LGYRELDYPE QLRRDILAAL 
PPAGCSAEQL TKLDTRIGQA FADAAATVID EIADGRADLV ASLGQTVFHW VEEGRVEGTL
QLGQPAWIAE RTGLPVVADL RVRDVAAGGH GAPLASTLDA LWLRAEAERE GKPVAALNIG
GIANLTVVRP DGSVLAYDTG PGNALLDIAA AEVTGGAQHS DVDGALAARG TVRDDLLSRL
LADPYYSQVP PKSTGKEYFH AAYLRQAVEG LPEIDGPDLL ATLTELTAAT VAAECERHGV
STVVASGGGL RNPALMTALG ARVTVVPSDD KGLPSDGKEA YLTALLGWLT WNGLPANVPS
ATGAAGARLL GAITPGAGPL LPPTPHPRPV TRLRVTPPDT P