Gene Svir_09520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09520 
Symbol 
ID8386289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp977429 
End bp978562 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content68% 
IMG OID644975042 
Producthypothetical protein 
Protein accessionYP_003132836 
Protein GI257055004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.839011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.393278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC ACACTCAGCC CGCTGTCCGT GCCTATCTGG CCCGCGTGCG GACGGCGTTG 
TCCGATCTGC CGGCGGGCGA GGTCGACGAG ATCGTCGACG ACGTGCGACC CCATCTGGCC
GAGATCGCCG AGAGCCTGGG CGAGCGGGCG AGCGTGGACG CCATGATCGA GGAGTTGGGG
ACACCCGAGA GCTACGCGGC CGAGGTGCGG GCCGCGGGTG ACTACCCACC TCCTCCGTCG
GTGAACACGG GGGAGGGTGA CCGGAAGTCG GGCCGGGCCG GGGCACGGAT GTCCCTGTGG
GGGTTGGTGC TCGGTGCGTT CGGTGCCATG GTGATGGGCA TCGTCATCGG TTCCAGCCGG
AACGACGAGG CGCTGGTGCC GTTGCTCGTC GTGGCGGTCC TGGCCGCGGC AGCGGCCGCG
TATGTCTGGA TCAACGGGCC CGGGGTCGTG CGGTCGCTTC CCGAGGTTCG GTGGTTCGTC
GCCGGATCCG GCGGTGTGTG GTCCCAGCGG CTGAACACCG CTTTGCAGGC GCTCAACCCG
GTGTGGTGGT GGCTGTCCGC GGCGTTGCTG ACTTTGCTGG CCATCGTCCT GGTGGCCGAG
TGGTACAACG GCGTGCTGGG GCTGCCGGTG CTGTTGGCCG TGGCCGCGTT GGCGTTGTGG
GCGGGGCCGA AGAGCCGTAC CGACCGGAGG ATGCTGTGGG CGGCCGTTCC CGTGTCGGCT
TTCGTGGTGG GCGCGGGGCT GGGTCTTGCG GGACACCTGA TCGAGTCCGC TCACGGCCAC
TCCGGTGATT TCCACGCGTA CGAGGCCACG AACACCACCA TCGACGGAGA ACCGTTGCTG
CTCTACGGCC AGGAGGAGGT GGAGAACCTC TACCTGTTCG ACTCCGAGGG CACGCCACTG
ACCGACGTCT ACATCTACAC CGACGACGGC AGGCCGTTGC TGGCCCAGCG TTACGGGTGC
GAACAGCACA CGCAGGAGAA GATCCCGGTC GGGCGGGACA ATCACTTCCC CCGGCCCCAC
ATCGAGCAGG GCGGTGTGGA CGAATTCGGC ACCGTCAACG GGTACAACGC CTACCGGGCG
TTCTGTCAGG AGGTCGACGA GGTGCCGTTC ACGGTGGCCG TGCCCGTCGA ATGA
 
Protein sequence
MSTHTQPAVR AYLARVRTAL SDLPAGEVDE IVDDVRPHLA EIAESLGERA SVDAMIEELG 
TPESYAAEVR AAGDYPPPPS VNTGEGDRKS GRAGARMSLW GLVLGAFGAM VMGIVIGSSR
NDEALVPLLV VAVLAAAAAA YVWINGPGVV RSLPEVRWFV AGSGGVWSQR LNTALQALNP
VWWWLSAALL TLLAIVLVAE WYNGVLGLPV LLAVAALALW AGPKSRTDRR MLWAAVPVSA
FVVGAGLGLA GHLIESAHGH SGDFHAYEAT NTTIDGEPLL LYGQEEVENL YLFDSEGTPL
TDVYIYTDDG RPLLAQRYGC EQHTQEKIPV GRDNHFPRPH IEQGGVDEFG TVNGYNAYRA
FCQEVDEVPF TVAVPVE