Gene Svir_09510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09510 
Symbol 
ID8386288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp977109 
End bp977432 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID644975041 
Producttranscriptional regulator, PadR family 
Protein accessionYP_003132835 
Protein GI257055003 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.498358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.224928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAACGA GTCAACTGCT GAAGGGCGTA CTCGACCTCG CGGTTCTGGC GGTGCTCCGT 
CACGAGGACG GCTACGGCTA TGACGTGGTG CGCAGGCTGC GCAAAGCGGG TCTGGACGAG
GTCGGGGACG CCTCCGTGTA CGGCACGCTG CGGCGGCTGT ACAAAGCCGG ACTGCTGACC
ACGTACGTCG TGGCCAGCGA GGAAGGCCCA CACCGCAAGT ACTACAGCCT CAACGAGCTG
GGCCGGGCGC GGTTCGTCGA GTCGGCGAAG ACATGGCGAG GTTTCGCGGC CACGATGGAG
CGCCTGTTGG GAGAGGAGCT ATGA
 
Protein sequence
METSQLLKGV LDLAVLAVLR HEDGYGYDVV RRLRKAGLDE VGDASVYGTL RRLYKAGLLT 
TYVVASEEGP HRKYYSLNEL GRARFVESAK TWRGFAATME RLLGEEL