| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09500 |
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| Symbol | |
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| ID | 8386287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 976161 |
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| End bp | 977024 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975040 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003132834 |
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| Protein GI | 257055002 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.796001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.248417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGAGC TGCCTGAGGT CGAGGTTGTA CGGGCCGGTC TTGAAAAGCA CGTGCTCGGG
CGGATCGTCT CCTCGGTCGA GGTGCTGCAC CCGAGGGCGA TCCGTCGGCA CGTGCTCGGC
GAGGCCGATT TCGTCGGTCG TCTCGTCGGC GCGAAGATCA CGGCGGTGTG CCGTCGAGGA
AAGTACCTGT GGTTCGAGCT GGCCGACGGC ACGGCTGTGC TCGCACATCT CGGGATGAGC
GGCCAGATGC TGATCCAGCC TCGGGGCGTG GTCGACGAGA AACATCTGCG GGTGCGCTTC
CGGTTCTCAG ACGACGGGCC GGAGTTGCGG TTCGTGGATC AACGCACTTT CGGTGGTCTG
TCGTTGACGG ACCTGGTGGA GGTCGAGGGC ACGGTGTTGC CTTCGGCCAT AGCCCATATC
GCGCGTGATC CGCTGGACCC GCTGTTCGAC GTCGTGGCCA CGGCGCGTGC GTTGCGGACG
CGTCGTACCG AGGTCAAGCG CGCGTTGCTG GACCAGACCT TGGTGTCCGG GATCGGCAAC
ATCTATGCCG ATGAGGCGTT GTGGCGGGTC GGGTTGCATT GGGCCCGGCC CGCGGATCGT
CTCACCGCGA CGCAGGCCCG TGGTGTGCTG GCGGCCGCGG CCGAGATGAT GGTCGAGGCG
TTACGAGTGG GCGGCACGTC GTTCGATGCG CTCTATGTCA ACGTCAACGG TGAGTCGGGG
TACTTCTCCC GATCCCTCGA TGCCTACGGC CGGGAGGGTG AGCCTTGTCG TCGCTGCGGT
TCGTTGATCG TGCGTGAGGC GTTCACGAAC CGGTCATCCT TCAGTTGTCC TCGGTGTCAG
CCGAAGCCGC GTTCGCGGCG TTGA
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| Protein sequence | MPELPEVEVV RAGLEKHVLG RIVSSVEVLH PRAIRRHVLG EADFVGRLVG AKITAVCRRG
KYLWFELADG TAVLAHLGMS GQMLIQPRGV VDEKHLRVRF RFSDDGPELR FVDQRTFGGL
SLTDLVEVEG TVLPSAIAHI ARDPLDPLFD VVATARALRT RRTEVKRALL DQTLVSGIGN
IYADEALWRV GLHWARPADR LTATQARGVL AAAAEMMVEA LRVGGTSFDA LYVNVNGESG
YFSRSLDAYG REGEPCRRCG SLIVREAFTN RSSFSCPRCQ PKPRSRR
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