| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09360 |
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| Symbol | |
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| ID | 8386273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 962517 |
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| End bp | 963794 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975026 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132820 |
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| Protein GI | 257054988 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACA CACGACTGCG CAAACTCGGG GTCCGCCTCG CGGGCGTGGC CTTCTGCCTC
GTCCTCGTGT TGCTGGTGGA CCTGTCCGTC CGCGTCTACA ACAAGGAGTT CACCGAATCG
GTGTCGGTCA CGTTGCGCAC CGACCACGTG GGCAACCAGT TGCGACAGAA CTCCGACGTC
AAAGCCAGAG GCGTGCTGGT CGGTGAGGTC CGCGCGATCA GGGCGGTGCC CGGCGGCGCG
GAGATCGACC TCGCCCTCGA ACCGGACGCC GTGTCGCGAC TGCCGAAGGA CGTGACGGCC
CTGCTCGTCC CCAAGACGCT GTTCGGCGAA CGCTACGTGC AACTGTCCAT CCCCGACGAC
TCCACCGCGG CCCCGCTGTC CGACGGTGAC GTCATCACCC AGGACCGGTC GCGCAACGCC
ATCGAACTGG AGCGGGTGTT CGACGAGCTG CTGCCCGTAC TCACCTCCGT GCAACCGCAG
AAGCTCGCCA GCACCCTGAG CGCGGTGGCC ACGGCCCTGG AGGGCCGGGG GGAACAGATC
GGCGACACCC TCGTGGCCGC GGCGAACTAC CTCGAGGAGT TCAACCCCCA CCTGCCCAGG
CTCCACGAGA ACATTCGCGA CCTCGGCGAG GTGGCTCAGC TGTACGGCGA CATCTCCCCC
GACATCCTCG ACGCGCTGAC CGACGCGAGC GTCACGCTGG GCACCGTGCA GGATCGCGGC
ACCCAGTTGC GAGGCCTGTA CGCGCACGTG ACCGTCACCG CCACCGACCT CACCGGATTC
CTGCGAGCCA ACGCCGACAA CCTCATCCGG GTGTCGGCCG AAAGCCGGGC GCCGCTGGAA
GCCGCCGCAC GCTACTCCCC GGGCTTCGCG TGCACCCTCA AGGCCCTCGA CGAACTCAAA
CCCGCCATGG ACGCGGTACT CGGGGAAGGC ACCGACGTCC CCGCCCTGCG CATGCAGGGG
ACCGTCACCA CCTCCCCGCG TGGCAAGTAC GTGCCCGGCC GGGACGACCC GCGTCCCCAT
GCCGACACCG GACCTCGCTG CTATCCCAGC GGCATCACAC CACGGGACGA CACGCCACCC
CCACCCGCGC GGGACACGGC GTCCCCGACC GTCCCGGGGA CCGGAACGGA CCTCGGGCTG
CCCAACTCCC CGCAGGAACG ACAGTTGCTG TCCACACTGC TCGCCGGGGA CCTGGAGGTC
ACCGCCGAGG AGGTCCCCGA TTGGAGCAGT GTCCTCGTCG GACCGATCTA CCGGGGTGCG
GAGGTGACCC TGCGATGA
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| Protein sequence | MRNTRLRKLG VRLAGVAFCL VLVLLVDLSV RVYNKEFTES VSVTLRTDHV GNQLRQNSDV
KARGVLVGEV RAIRAVPGGA EIDLALEPDA VSRLPKDVTA LLVPKTLFGE RYVQLSIPDD
STAAPLSDGD VITQDRSRNA IELERVFDEL LPVLTSVQPQ KLASTLSAVA TALEGRGEQI
GDTLVAAANY LEEFNPHLPR LHENIRDLGE VAQLYGDISP DILDALTDAS VTLGTVQDRG
TQLRGLYAHV TVTATDLTGF LRANADNLIR VSAESRAPLE AAARYSPGFA CTLKALDELK
PAMDAVLGEG TDVPALRMQG TVTTSPRGKY VPGRDDPRPH ADTGPRCYPS GITPRDDTPP
PPARDTASPT VPGTGTDLGL PNSPQERQLL STLLAGDLEV TAEEVPDWSS VLVGPIYRGA
EVTLR
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