| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09340 |
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| Symbol | |
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| ID | 8386271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 960533 |
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| End bp | 961522 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975024 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132818 |
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| Protein GI | 257054986 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.677284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCCGA TGAAGTCCTT TCAGGAACGC AATCCCCTCG TGCTCGGCGC GGTGGGCACC
GCTCTGCTCG CCGGCGTGCT CGTGGCGACG GTGAACTACG AGAACCTGCC CCTCATCGGC
GGTGGCACCA CCTACCAGGC CGAGTTCGCC GAGGCGGCCG GGCTCGCCCC CACCAACGAG
GTGCGGGTGG CCGGCATCAA GGTCGGAGAG GTCACCGACG TGGAACTCGC CGAGGATCGG
GTCCTCGTGT CGTTCCGCGT CTCCGACGCG TGGATCGGGA ACAGGACGTC GGCCGAGATC
AAGATCAAGA CCTTGCTGGG GCAGAAGTAC CTGGCCCTCC ACCCGATGGG CGACGCGGTG
CTGGACCCGG ACGACCCCAT CCCACTCGGC CGCACCACCA CGCCGTACGA CGTCACCACC
GCCTTCGAAC AACTCGCCAC CACGGCGGGT TCCATCGACA CCGAACAACT GGCCCGAAGC
TTCCGCACCC TCGGACAGAC CTTCGACGGT GCGGAGGAAC ACGTGCGCAG CGCCCTGAAC
GGACTGACCT CGCTGTCACG GACCATCGCC TCCCGCGACG AGGAACTCGC CGACCTCCTC
GCCAACGCGC ACACCATCGC CGACACCCTC GCCGACTCGA GCGACGAATT CGACCGTCTC
ATCGAGGACG GCAACCTGCT GCTCACCGAG CTCGACCATC GGCGCGAGGC CATCCACGAC
CTGCTCGCCG GGGCCCAGGA CCTCGCCGAA CAGATCTCCG GACTGGTCGC CGACAACACC
GAACAACTTG CGCCCACGCT CGCCGAACTC GACGCGGTGA CGGACATCCT GCAGCAGCAC
CGCGACGAAC TCGACCGCAC GCTCGAACTC GCCGGACCGT ACTTCCGGGT CGTCAACAAC
GCCGTGGGCA GCGGTCGTTG GCTCGACGTG TACGTGTGCG GGTTGGTCGC CGACAACCGT
CATCCCTGCA AGGCCCCGGA ACGGAGGTGA
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| Protein sequence | MHPMKSFQER NPLVLGAVGT ALLAGVLVAT VNYENLPLIG GGTTYQAEFA EAAGLAPTNE
VRVAGIKVGE VTDVELAEDR VLVSFRVSDA WIGNRTSAEI KIKTLLGQKY LALHPMGDAV
LDPDDPIPLG RTTTPYDVTT AFEQLATTAG SIDTEQLARS FRTLGQTFDG AEEHVRSALN
GLTSLSRTIA SRDEELADLL ANAHTIADTL ADSSDEFDRL IEDGNLLLTE LDHRREAIHD
LLAGAQDLAE QISGLVADNT EQLAPTLAEL DAVTDILQQH RDELDRTLEL AGPYFRVVNN
AVGSGRWLDV YVCGLVADNR HPCKAPERR
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