| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09320 |
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| Symbol | |
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| ID | 8386269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 958453 |
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| End bp | 959532 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975022 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132816 |
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| Protein GI | 257054984 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.906316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGAC TCGCCCGCAT CATCGCGGCC GGAACCGCGG CGGCGTGCCT GCTGACGTCC
GCCGGCTGTG CCGCGGAGTT CGGCGGCCTC CACGACCTCC CCCTGCCCGG CGGCGCCGAC
CTCGGCGATC ATCCCTATCG GGTCACGGCG CACTTCGACG ACGTACTCGA CCTCGTGCCG
AACGCGGCGG TGAAGGTCAA CGACGTCGCC GTCGGCAGGG TGGAATCCAT CGAACTCGCC
GACACCGACG ACTGGCAGGC CGAAGTCGTC CTGCTCGTCA ACGGGGACGT CGACCTGCCC
GCCGACACCG TGGCCAACGT CCGCCAGTCC AGCCTGCTCG GCGAGAAATT CGTCGAGCTC
GAAGCGCCCC GGCACAACGG CGACGAACCC AGAGTCCCCC TCACGGACGG CGCGCTCATC
CCCGTCTCCC GCACCAACCG GCACGTCGAG GTCGAAGAGG TCTTCGGGGC GTTGTCCCTG
CTGCTCAACG GTGGCGGCAT CACACAACTA CGCACCATCA ACCGGGAGTT GAACGAGGCG
CTGACCGGGA ACGAGGTCAA GATCAAGGAG TTTTTGAACC ACATCGACCA CCTGGTGTCC
GATCTCGACT CCCACCGCCA CGACATCACC GCGGCCCTCG ACGGCCTCAA CCGACTGTCG
GCCACCCTCG CCGAACGGGA GGACGACGTC AGAAACGCCC TCAACGACCT GACCCCGGGG
CTGGCGGAAC TGCGGGATCA GCGCAAACAG CTGCTGACCA TGTTGACGTC GCTCGACGAG
CTCTCCGACG TCGCCGTGAA CGTGATCGAC AAGACCAGGG ACGACCTGGT GGCCGACCTC
GAGGCGCTCG CCCCCGTCCT CGACGGCCTC GCCGAGGCGG GACAGTCCCT GCCCCGGTCG
CTGGAGATCC TGGCCTCGTT CCCGTTCACC GACGCCGTGC TCGACGGCAT CGAGGGCGAC
TACCTCAACA CCCTCGTCGA GATCGTCCCC GCCGACGGCT ACGCGGCACC GACCCCCATG
TTGCCGTTGC CCACCACCGC GACCCCGACC GCGGCCGCGA CCGACGGAGG TGACCGCTGA
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| Protein sequence | MKRLARIIAA GTAAACLLTS AGCAAEFGGL HDLPLPGGAD LGDHPYRVTA HFDDVLDLVP
NAAVKVNDVA VGRVESIELA DTDDWQAEVV LLVNGDVDLP ADTVANVRQS SLLGEKFVEL
EAPRHNGDEP RVPLTDGALI PVSRTNRHVE VEEVFGALSL LLNGGGITQL RTINRELNEA
LTGNEVKIKE FLNHIDHLVS DLDSHRHDIT AALDGLNRLS ATLAEREDDV RNALNDLTPG
LAELRDQRKQ LLTMLTSLDE LSDVAVNVID KTRDDLVADL EALAPVLDGL AEAGQSLPRS
LEILASFPFT DAVLDGIEGD YLNTLVEIVP ADGYAAPTPM LPLPTTATPT AAATDGGDR
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