| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09310 |
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| Symbol | |
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| ID | 8386268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 957269 |
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| End bp | 958453 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975021 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132815 |
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| Protein GI | 257054983 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.91288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCC GGCGGATCAA GACCCAGGTC ATCGCATTCG TCGTGGTGGC TTTGGCCGCC
ACCACGTTCG TCGGCGCCAG CTACGCCGGG CTCGGCCGGC TCCTCGGCCG GGACGGACTC
TCCGTCCACC TGCAACTCGC CGACGGCGGC GGCTTGTTCC CCGGCAGCGA GGTCACCTAT
CTGGGCGTCG CCGTGGGCGA GGTCGACAGG CTCCACCTCA CCGACGACGG CATGGAAGCC
GTTCTCGTCC TCGACGAGGA CGCACCCGCG ATCCCCGCCG ACTCCCACGC CGTGGTCGCC
AACCGGTCGG CCGTCGGCGA GCAGTACGTG GATCTGCGCT CCCCCACCGG ACGGGCTCCC
TACCTCGAGG ACGGGTCGGT GATCCGGCGC GAGTCCACCA CCCTCCCCCT TCCCGTGCAC
ACCCTGCTGA GCAACCTCAA CGCGTTCACC GAATCCGTGC CCACCGAATC CCTGCGCACC
GTCGTGGACG AGTTGTACAC CGCTTTCCAG GGGACCGGCG ACGACCTCCA GGTGCTCCTC
GACTCCTCAC GCGAGTTCAC CCACACCGCC ACCGAGTACC TGCCCCAGAC CACCACCCTC
ATCGAGGACG GCGCGACCGT GCTGCGCACC CAGGCCGAAT CGGCCGAGGC CTGGCGCTCG
TTCGCCGACA ACACCAAGCT CTTCGCCCGG GAACTCGCCG GCGCCGACGG GGATCTACGC
GAACTCATCG CCCGCACCCC CGGAGCGGCC ACGCAACTCA GCGGCCTGCT GTCCGACACC
GACCCCGGAC TGTCGGTGCT CATCGCGAAT CTGGTGACCA CGTCACGACT GTTCTCCGAC
CGGGTGGACG GGCTGGAGCA CCTGTTCGTC ATGCTGCCGA AGGCGACCGC GGCCACGTCC
GCCGCGCTCG ACGGTGACCA ATTCTCGGTG GCGCTGACGT TCTTCGACCC CCCGCCGTGT
CTGCGCGGTT ACGAAGGGAC CCCCCGCCGC GCCGGGGAGG ACGGCAGCGA CGCACCGTTC
AACACCGATG CCGCGTGCAC CGTGCCCCAC GGGGACCCGC GTGCCGTGCG AGGGTCGCAG
CACGTGCCGG AAGGCGGCCT ACCACCGGTG GTGCCACCGG GTGTGTCCAC CGGTGACGAC
AACACCCGCA CCTCGTTGAG GGATCTGCTG TGGCTCGACG AATGA
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| Protein sequence | MLTRRIKTQV IAFVVVALAA TTFVGASYAG LGRLLGRDGL SVHLQLADGG GLFPGSEVTY
LGVAVGEVDR LHLTDDGMEA VLVLDEDAPA IPADSHAVVA NRSAVGEQYV DLRSPTGRAP
YLEDGSVIRR ESTTLPLPVH TLLSNLNAFT ESVPTESLRT VVDELYTAFQ GTGDDLQVLL
DSSREFTHTA TEYLPQTTTL IEDGATVLRT QAESAEAWRS FADNTKLFAR ELAGADGDLR
ELIARTPGAA TQLSGLLSDT DPGLSVLIAN LVTTSRLFSD RVDGLEHLFV MLPKATAATS
AALDGDQFSV ALTFFDPPPC LRGYEGTPRR AGEDGSDAPF NTDAACTVPH GDPRAVRGSQ
HVPEGGLPPV VPPGVSTGDD NTRTSLRDLL WLDE
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