Gene Svir_09290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09290 
Symbol 
ID8386266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp956263 
End bp956760 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID644975019 
Producthypothetical protein 
Protein accessionYP_003132813 
Protein GI257054981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.485806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.984145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCGCC GTGTCCTGGC GTCGTTGGTC CTCGCAGCCC TGCTCACCGG TATCGGGACG 
GTGGGCGTCC TGCAGGCGGA GCAGGCGCGG ACGTCACCGT CGGCGCGTAA TCTCGCCCAT
GTCGACGTCG ACGCCACGTT GGAGGTGCGT TCGGCGGTCA CGCGGGCGGT GAACAAGATA
CTGACCTACC ACCACGACGA CGTGGAGGCC ACCGCCCACG CCGCCGAGGG CCTGCTACGC
GGAGCCGCAC GCGAAGAATA CCGACGGCTG TTCACCCACG TGAGCGGTCA CGCACCAAAG
CAGCGGCTCA GCGTCCTCAC GCGCGTGGTG GACACGGCGG TGCTGTCGTT GACGAAAAAC
CGCGCGGAAG TGCTCGTGTT CACCGAGCAG ACCGCGACCC GCGACGACGG CGAACCGACG
TACGCCGCGG CCCAACTCGT GGTCACGGTC GAACGCCACG ACGACCGCTG GCTGGTGACC
GACCTGACCC AACTTTGA
 
Protein sequence
MNRRVLASLV LAALLTGIGT VGVLQAEQAR TSPSARNLAH VDVDATLEVR SAVTRAVNKI 
LTYHHDDVEA TAHAAEGLLR GAAREEYRRL FTHVSGHAPK QRLSVLTRVV DTAVLSLTKN
RAEVLVFTEQ TATRDDGEPT YAAAQLVVTV ERHDDRWLVT DLTQL