Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09140 |
Symbol | |
ID | 8386251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 938992 |
End bp | 939393 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975005 |
Product | cupin domain-containing protein |
Protein accession | YP_003132799 |
Protein GI | 257054967 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.721654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGCCG TGCCCGAGAA CACCATCGCG CCCCTGCCCG CTGATGTGCT GTCCCGCCAT CCCGTGCGGA CGGCCATGGA GTTCGCCGCC GATCGAGGCC GTTGGCGCTC GCTGCTGCGT TACGACCCGG ACGAACGGTT CGCCGTCCTG GTCGACACCG TGGTCAGCGG GGAACTCGTC GAAACGGTCC ACCGGGACGG GTCGCCCGGC GTGATGGCGG AGACACACGT GGTGCGGGCC GGGAGTTCGC GGGTGTTCGG ACCGGGCTAC GTGCACCGGG TCCGTAACGT CGGTCCCGAT CCCGCCGTGA GCGTGCACGT CTATCAGGAC GGGGACAGGA CCGTGCGTCC CGTGCGGTGG TCGGACGCGT GCCCGAAGGC GGTGACCGCG ACGGACGCGT AG
|
Protein sequence | MFAVPENTIA PLPADVLSRH PVRTAMEFAA DRGRWRSLLR YDPDERFAVL VDTVVSGELV ETVHRDGSPG VMAETHVVRA GSSRVFGPGY VHRVRNVGPD PAVSVHVYQD GDRTVRPVRW SDACPKAVTA TDA
|
| |