Gene Svir_09140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09140 
Symbol 
ID8386251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp938992 
End bp939393 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content70% 
IMG OID644975005 
Productcupin domain-containing protein 
Protein accessionYP_003132799 
Protein GI257054967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.721654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCG TGCCCGAGAA CACCATCGCG CCCCTGCCCG CTGATGTGCT GTCCCGCCAT 
CCCGTGCGGA CGGCCATGGA GTTCGCCGCC GATCGAGGCC GTTGGCGCTC GCTGCTGCGT
TACGACCCGG ACGAACGGTT CGCCGTCCTG GTCGACACCG TGGTCAGCGG GGAACTCGTC
GAAACGGTCC ACCGGGACGG GTCGCCCGGC GTGATGGCGG AGACACACGT GGTGCGGGCC
GGGAGTTCGC GGGTGTTCGG ACCGGGCTAC GTGCACCGGG TCCGTAACGT CGGTCCCGAT
CCCGCCGTGA GCGTGCACGT CTATCAGGAC GGGGACAGGA CCGTGCGTCC CGTGCGGTGG
TCGGACGCGT GCCCGAAGGC GGTGACCGCG ACGGACGCGT AG
 
Protein sequence
MFAVPENTIA PLPADVLSRH PVRTAMEFAA DRGRWRSLLR YDPDERFAVL VDTVVSGELV 
ETVHRDGSPG VMAETHVVRA GSSRVFGPGY VHRVRNVGPD PAVSVHVYQD GDRTVRPVRW
SDACPKAVTA TDA