Gene Svir_09090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09090 
Symbol 
ID8386246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp932880 
End bp933797 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID644975000 
ProductNTP pyrophosphohydrolase 
Protein accessionYP_003132794 
Protein GI257054962 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.197751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGG TCGTGAAGGC CGCGGGGGCG GCACTGTGTC GCCGAACCTC CGCAGGGACC 
GAGATCGCAG TCGTGCACAG GCCCCATTAC GACGACTGGT CACTACCGAA AGGAAAACTG
GACCCCGGGG AGACCTCCCC CGTCGCCGCC GTCAGAGAAG TGGCGGAGGA GACCGGCTTC
GACGCCGCTC TCGGCCAGTT CCTCACCACC GTCGAATACG ACGTGCACGG GGCGCCGAAA
AAGGTGGACT ATTTCACAGC GCAGACCGTT TCCGGCGAGT TCACCCCCAA TGAGGAAGTG
GACGAATTGC GCTGGCTGCC GCTGCAGGAG GCGCGATCGC TTCTGACCTA TCCCAGCGAC
CGCGACGTCT GTGACCTCGC CGGGAGATTG CCTTCGGACA CCGCCACCGT GCTGCTGGTA
CGGCACGCCA AAGCGGGTAA ACGGGAGGAT TGGGCGGGAG ACGACGACCT CCGTCCGCTC
TCGGACGCGG GAATCCGCCA GGCCGAGGCG TTACGGCCGT TGTTGGGCGC GTTCCGCCCC
GAACAGGTGT ACTCGGCGCC CCGGCTGCGG TGTGTCCAGA CGGTACGTGC CGTGGCCGAC
GACATCGACG GTGAGGTGCA GATCGAACCG TCGATCTCGG AAGAGGAGTA CTCCAAAAAC
CCCGAGATCG GGATCAAATG GCTGCTGTTC GTAGCGGCCT CGCACACCAG CTCGGTCGTG
TGCAGCCAGG GCGGTGTCAT ACCCGATCTG CTCGACACCC TGGCGCAACG GCACGGCGTC
GAGCTGCCCC GGAAACGAAC GGGCGAGGTG CCGAGCAAGA AGGGCTCGGT GTGGGTGCTG
TCGTTCGACA CCACCAACGA CACTCCCCGG CTCGTGGCGG CTCACTACCT GCCCACCGCG
CTGCCCGAAC CCTGTTGA
 
Protein sequence
MSKVVKAAGA ALCRRTSAGT EIAVVHRPHY DDWSLPKGKL DPGETSPVAA VREVAEETGF 
DAALGQFLTT VEYDVHGAPK KVDYFTAQTV SGEFTPNEEV DELRWLPLQE ARSLLTYPSD
RDVCDLAGRL PSDTATVLLV RHAKAGKRED WAGDDDLRPL SDAGIRQAEA LRPLLGAFRP
EQVYSAPRLR CVQTVRAVAD DIDGEVQIEP SISEEEYSKN PEIGIKWLLF VAASHTSSVV
CSQGGVIPDL LDTLAQRHGV ELPRKRTGEV PSKKGSVWVL SFDTTNDTPR LVAAHYLPTA
LPEPC