Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_08930 |
Symbol | |
ID | 8386230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 917729 |
End bp | 918871 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644974984 |
Product | hypothetical protein |
Protein accession | YP_003132780 |
Protein GI | 257054948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.851117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTCCT GGAACGATGT CGAGGAGTGG GACGCCGACG GCGTCGCTGC GGTCGGTGAC GCGCTCGTGA AGGCCCGCAA CGCGATCGTC GAGCTGGAGG ACGAGCTCAC CGACTCCGCT TCTCCGGAGG AATGGACCGG GCCGAGCGCG GAGTCCGCGC GGCAGAACCT GGCCAAGTAC CGCCAGGACC TGGAGACCCT TGTCACCGAG GTGGCGGCGA TGGTCGCGAC GGTCGACACG GTCGAGGACG CGGTCCGGCA ACTCCGTCGG GACATCGACG AGGCGAAGGG ACTGGCGGCG ACCCACGGTT TCCGGATCGA CGACGGAAGG ATCGTCGAAC CGGAGGGGGA GGCCGGGGCC GATACGGCGT CCGTCAAGTC GGACCTCGTC GAGCGGGTGG ATTCCATCCT CGCCAAGGCG AAGGAAGTGG ACACCGACCT CGCCACGATG TTGGACAAGG TCCTCGCCGA CAAGATCAGC GATGAGGGCG CGACCACGCT CGCCCAGGCC GCCGAGGTGG GGGAGGAGCG TGTTCGACTC GACCGGATCC TGGAGGACTA CCAGGTCGAT CCGGACCCGG ACGGGCTGGT CAACTTCTTC GGCAAGACGA TCACGAAGTC GGAGGCCGAG TTGCTCGACG ACATCGGCCT GCTCGGGATC AAGGACATGT ACGACATCCA GAACAAGGCT TTCGAAACCG CGGAGGAACG GTTCGAAGGA CAGGACTCCA ACGACAGCCA TCAAGATGCG TTCCGGCATG CGTACTGGAA CGCGCTCATG ACGCAACGGT TCGGCGAGGA GTGGGCGGAG CAGTACGGCA CGGCCCACGA GCGGTTGCCG GGCAACCCCG CCGATCGGGA GGCCATGGAC CTCTACAACA ACGAGGTGGG TCGCAAGATC GCGGTGGATA ACCCGGACGC CGACCCGAAG AAGTTGGCGG ATCTCGTCGA GCAGGCGGTG AAGGACGGCC GCATGGTGGT GATCGACGAG AACGGTGAGC TCGCCTACAG CGATGACGTC GCTGAGGGGA AGACCGGGAG AGCCGATGAT CCGGCGCCGG AAAAGGAAGG CGGCGACGTC GCTGGCTCGC ACACCAGCGG GGGCTCCGGT GACAACAGTG GCGACTACGA CTGGGGTAGC TGA
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Protein sequence | MVSWNDVEEW DADGVAAVGD ALVKARNAIV ELEDELTDSA SPEEWTGPSA ESARQNLAKY RQDLETLVTE VAAMVATVDT VEDAVRQLRR DIDEAKGLAA THGFRIDDGR IVEPEGEAGA DTASVKSDLV ERVDSILAKA KEVDTDLATM LDKVLADKIS DEGATTLAQA AEVGEERVRL DRILEDYQVD PDPDGLVNFF GKTITKSEAE LLDDIGLLGI KDMYDIQNKA FETAEERFEG QDSNDSHQDA FRHAYWNALM TQRFGEEWAE QYGTAHERLP GNPADREAMD LYNNEVGRKI AVDNPDADPK KLADLVEQAV KDGRMVVIDE NGELAYSDDV AEGKTGRADD PAPEKEGGDV AGSHTSGGSG DNSGDYDWGS
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