Gene Svir_08930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08930 
Symbol 
ID8386230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp917729 
End bp918871 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID644974984 
Producthypothetical protein 
Protein accessionYP_003132780 
Protein GI257054948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.851117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCCT GGAACGATGT CGAGGAGTGG GACGCCGACG GCGTCGCTGC GGTCGGTGAC 
GCGCTCGTGA AGGCCCGCAA CGCGATCGTC GAGCTGGAGG ACGAGCTCAC CGACTCCGCT
TCTCCGGAGG AATGGACCGG GCCGAGCGCG GAGTCCGCGC GGCAGAACCT GGCCAAGTAC
CGCCAGGACC TGGAGACCCT TGTCACCGAG GTGGCGGCGA TGGTCGCGAC GGTCGACACG
GTCGAGGACG CGGTCCGGCA ACTCCGTCGG GACATCGACG AGGCGAAGGG ACTGGCGGCG
ACCCACGGTT TCCGGATCGA CGACGGAAGG ATCGTCGAAC CGGAGGGGGA GGCCGGGGCC
GATACGGCGT CCGTCAAGTC GGACCTCGTC GAGCGGGTGG ATTCCATCCT CGCCAAGGCG
AAGGAAGTGG ACACCGACCT CGCCACGATG TTGGACAAGG TCCTCGCCGA CAAGATCAGC
GATGAGGGCG CGACCACGCT CGCCCAGGCC GCCGAGGTGG GGGAGGAGCG TGTTCGACTC
GACCGGATCC TGGAGGACTA CCAGGTCGAT CCGGACCCGG ACGGGCTGGT CAACTTCTTC
GGCAAGACGA TCACGAAGTC GGAGGCCGAG TTGCTCGACG ACATCGGCCT GCTCGGGATC
AAGGACATGT ACGACATCCA GAACAAGGCT TTCGAAACCG CGGAGGAACG GTTCGAAGGA
CAGGACTCCA ACGACAGCCA TCAAGATGCG TTCCGGCATG CGTACTGGAA CGCGCTCATG
ACGCAACGGT TCGGCGAGGA GTGGGCGGAG CAGTACGGCA CGGCCCACGA GCGGTTGCCG
GGCAACCCCG CCGATCGGGA GGCCATGGAC CTCTACAACA ACGAGGTGGG TCGCAAGATC
GCGGTGGATA ACCCGGACGC CGACCCGAAG AAGTTGGCGG ATCTCGTCGA GCAGGCGGTG
AAGGACGGCC GCATGGTGGT GATCGACGAG AACGGTGAGC TCGCCTACAG CGATGACGTC
GCTGAGGGGA AGACCGGGAG AGCCGATGAT CCGGCGCCGG AAAAGGAAGG CGGCGACGTC
GCTGGCTCGC ACACCAGCGG GGGCTCCGGT GACAACAGTG GCGACTACGA CTGGGGTAGC
TGA
 
Protein sequence
MVSWNDVEEW DADGVAAVGD ALVKARNAIV ELEDELTDSA SPEEWTGPSA ESARQNLAKY 
RQDLETLVTE VAAMVATVDT VEDAVRQLRR DIDEAKGLAA THGFRIDDGR IVEPEGEAGA
DTASVKSDLV ERVDSILAKA KEVDTDLATM LDKVLADKIS DEGATTLAQA AEVGEERVRL
DRILEDYQVD PDPDGLVNFF GKTITKSEAE LLDDIGLLGI KDMYDIQNKA FETAEERFEG
QDSNDSHQDA FRHAYWNALM TQRFGEEWAE QYGTAHERLP GNPADREAMD LYNNEVGRKI
AVDNPDADPK KLADLVEQAV KDGRMVVIDE NGELAYSDDV AEGKTGRADD PAPEKEGGDV
AGSHTSGGSG DNSGDYDWGS