| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08910 |
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| Symbol | |
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| ID | 8386228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 915731 |
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| End bp | 917326 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974982 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003132778 |
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| Protein GI | 257054946 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAATC CCAGCCAGCC CGTCGTTCTC CTCGCCGAGA AACTCGCCCC TTCCGCAGTC
GACGTGTTCG GTGACGAGAT CGAGATCCGG CATGTGGACG GAACGGACCG CCCTGCGCTG
TTGCAAGCGG TGAAGGAGGC CGACGCGCTC CTGGTGCGAT CCGCCACGAA GGTCGACAAG
GAGGTCCTGG CCGAGGCCAC GAAGCTCAAG GTCGTCGCGC GTGCGGGTGT CGGTCTCGAC
AACGTCGACG TGGCCGAGGC GACCGAACGC GGGGTGCTCG TGGTGAACGC CCCGACCTCC
AACATCGTGT CGGCCGCCGA GCACGCCATC GCGCTGTTGC TGGCGGTGGC CCGCAACATC
CCGGCCGCCG ATCAGAGCCT GCGAAGCGGT GAGTGGAAGC GCAGCGCGTT CACGGGTGTG
GAACTGTCCG GAAAGACGGT CGGCGTGGTG GGCTTCGGCA AGATCGGCCA GCTCGTCGCC
TCCCGGCTCG CCTCGTTCGG CACGAAACTC CTCGCCTACG ACCCGTATGT CTCGGCCGCG
CGGGCCGCTC AGTTGGGTGC CGAGCTGGTG TCGTTGGACG AGCTGTTGGA GCGTGCCGAC
ATCATCACGA TCCACCTGCC GAAGACACCG GAGACCCAAG GGATCATCGG TGCCACGGCG
CTGTCGAAGG TCAAGCCCGG CGTGCTCATC GTCAACGCCG CTCGCGGTGG GCTCGTCGAC
GAGAACGCCC TCGCGGAGGC GTTGCGGGAA GGCCGTGTGG CGGGCGCGGG CATCGACGTG
TTCGTCGAGG AGCCCACGAC ATCGAGCCCG TTGTTCGAAC TGCCCAACGT CGTCGTCACC
CCGCACCTGG GTGCCTCCAC GCGAGAGGCA CAGGACCGAG CGGGCACCGA TGTGGCGCGT
TCGGTGTTGT TGGCGTTGCG CGGTGACTTC GTTCCCGACG CCGTCAACGT CACCGGTGGG
GCCGTCAGCG AAGAGGTGCG GCCGTACCTG GGGCTCACCC AGAAACTCGG CACGGTGCTC
TCCGCGTTCA GCGCCAAGGC CCCGTCGTCG GTGTCCGTGA TCGCCAGCGG CGAACTGGCC
AGTGAGGACG TCAGCGTGCT CCAGCTCGCC GCGTTGCGGG GGGTGTTCTC GAGTGTCGTC
GAGGACCAGG TCACGTTCGT CAACGCGCCG CGGCTGGCCG AGGAGCTCGG TGTGCAGGTG
AGCGTGTCGA CCCAGCCGGA GAGCACCAAC TACCGCAGCC AGGTCACCGT GCGCACCGTG
CACGCCGACG GCAGTTCGTA CTCGGTGTCG GGAGCGGTGA CGGGTAAGGA CGACGTGCAC
AAGCTGATCG AGGTCAACGG TCGGCACTTC GACATCCGCG CTGAAGGCCA CATGCTGCTG
CTGGAGTACC CGGACCGTCC GGGCATCATG GGCCGGGTCG GCACGTTGCT CGGTGAGGCG
GGCATCAACA TCGAGGCGGC GCAGATCAGC CAGACCACCA ACCGTGCCGA CGCGGTGATG
CTGCTGCGTG TCGACCGCGC CGTGAACGCC CACATGCTCG ACCCCATCGG CGCCACCGTC
GACGCGAAGA TGATCCGCGC GGTCAACTTC GACTGA
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| Protein sequence | MSNPSQPVVL LAEKLAPSAV DVFGDEIEIR HVDGTDRPAL LQAVKEADAL LVRSATKVDK
EVLAEATKLK VVARAGVGLD NVDVAEATER GVLVVNAPTS NIVSAAEHAI ALLLAVARNI
PAADQSLRSG EWKRSAFTGV ELSGKTVGVV GFGKIGQLVA SRLASFGTKL LAYDPYVSAA
RAAQLGAELV SLDELLERAD IITIHLPKTP ETQGIIGATA LSKVKPGVLI VNAARGGLVD
ENALAEALRE GRVAGAGIDV FVEEPTTSSP LFELPNVVVT PHLGASTREA QDRAGTDVAR
SVLLALRGDF VPDAVNVTGG AVSEEVRPYL GLTQKLGTVL SAFSAKAPSS VSVIASGELA
SEDVSVLQLA ALRGVFSSVV EDQVTFVNAP RLAEELGVQV SVSTQPESTN YRSQVTVRTV
HADGSSYSVS GAVTGKDDVH KLIEVNGRHF DIRAEGHMLL LEYPDRPGIM GRVGTLLGEA
GINIEAAQIS QTTNRADAVM LLRVDRAVNA HMLDPIGATV DAKMIRAVNF D
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