Gene Svir_08890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08890 
Symbol 
ID8386226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp914123 
End bp915136 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID644974980 
Productketol-acid reductoisomerase 
Protein accessionYP_003132776 
Protein GI257054944 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCG AAATCTTCTA CGACGCCGAC GCCGACCTCG GCATCATCCA GGGTCGCAAG 
GTGGCCGTGA TCGGATACGG CAGCCAGGGT CACGCGCACG CGCTGAGCCT GCGTGACTCC
GGTGTCGACG TCCGCATCGG GCTTCCGGAG GGGTCGAAGT CGCGGGCCAA GGCCGAGGAG
GAGGGCCTGC GCGTCCTCAC GACCGCTGAG GCCGCCGCCG AGGCCGACCT CATCATGATC
CTCGCCCCGG ACACCAAGCA GCGTGCCATC TACGAACAGG ACATCGCGCC GAACCTCAAG
GACGGCGACG CCCTGTTCTT CGGGCACGGC TTCAACATCC GCTACGGCCT CATCAAGCCG
CCCGCCAATG TGGACGTCGC GATGGTCGCC CCCAAGGGGC CGGGCCACTT GGTCCGCCGG
CAGTTCGTCG ACGGCAAGGG CGTGCCGTGC CTGATCGCGG TGGAGCAGGA CGCAAGCGGT
AACGCCCAGG CGCTGGCCCT GTCGTACGCC GCGGCCATCG GCGGTGCCCG TGCCGGTGTC
ATCAAGACCA CATTCGCCGA GGAGACCGAG ACGGACCTGT TCGGCGAGCA GGCGGTGCTC
TGCGGTGGGG CCTCGGCGCT CGTGCAGGCC GGTTTCGAGG TGCTGACCGA GGCGGGTTAC
GCGCCGGAGA TCGCGTACTT CGAGGTGCTC CACGAACTGA AGCTGATCGT GGACCTCATG
TACGAGGGCG GTATCGCGCG TATGCGGTAC TCGATTTCCG ACACCGCCGA GTACGGTGAC
CTCACGCGTG GTCCGCGGGT GATCACGTCC GAGGTCAAGG AAAACATGAA GGCGATTCTG
CGAGAGATCC AGGACGGCAC TTTCGCCAAC GAATGGGTCC GCGAGGACGA ACAGGGTCGC
CCGAACTTCA CCAAACTGCA GGAAACGGGT GAGAAGCACC CGATCGAGGA AACCGGCCGC
AAGCTGCGTG GCCTGATGTC CTGGGTGGAC CGGCCGATCA CCGAGACCGC CTGA
 
Protein sequence
MSVEIFYDAD ADLGIIQGRK VAVIGYGSQG HAHALSLRDS GVDVRIGLPE GSKSRAKAEE 
EGLRVLTTAE AAAEADLIMI LAPDTKQRAI YEQDIAPNLK DGDALFFGHG FNIRYGLIKP
PANVDVAMVA PKGPGHLVRR QFVDGKGVPC LIAVEQDASG NAQALALSYA AAIGGARAGV
IKTTFAEETE TDLFGEQAVL CGGASALVQA GFEVLTEAGY APEIAYFEVL HELKLIVDLM
YEGGIARMRY SISDTAEYGD LTRGPRVITS EVKENMKAIL REIQDGTFAN EWVREDEQGR
PNFTKLQETG EKHPIEETGR KLRGLMSWVD RPITETA