| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08750 |
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| Symbol | gatB |
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| ID | 8386212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 897417 |
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| End bp | 898922 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974966 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_003132762 |
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| Protein GI | 257054930 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTG TTGCCGACCT GATGGACTAC GACGAGGTCG TCGAGAAGTA CGACCCGGTG
CTCGGGCTCG AGGTGCACGT CGAGCTCAAC ACGAAGACCA AGATGTTCTG CGGCTGCCCG
AACGAGTTCG GGGGTGAGCC GAACACGCAC GTGTGCCCCA CGTGTCTCGG CCTTCCCGGC
GGGTTGCCCG TGGTCAACGG CAAGGCGGTC GAGTCGGCCA TCCGGATCGG CCTGGCGCTG
AACTGCGAGA TCGCCGAGTG GTGTCGGTTC GCCCGGAAGA ACTACTTCTA TCCGGACATG
CCGAAGAACT TCCAGACCTC GCAGCACGAC GAGCCGATCG CGTTCAACGG TTACCTCGAC
GTGGTGCTCG ACGACGGCGA GGTCGTGCGG GTGGGCATCG AACGTGCCCA CATGGAGGAG
GACACCGGCA AGTCGTTGCA CGTCGGTGGT ACCGCCGGGC GGATCCACGG TGCCGAGCAC
TCGCTGCTGG ACTACAACCG TGCGGGCGTG CCGCTCATCG AGATCGTCAC CAAGCCCATC
GAGGGCGTGG GGGAGCGGGC GCCGGAGGTC GCGCGGGCGT ACGTGACGGC CCTGCGGGAT
CTGCTGCGCG CCATGGACGT CTCCGACGTG CGCATGGACC AGGGGTCGCT GCGGTGTGAC
GCCAACGTGT CGCTGCGCCC GAAGGGCTCG ACCGAGTTCG GGACCCGCAC GGAGACGAAG
AACGTCAACT CGCTGCGCAG CGTCGAGCGC GCTGTGCGGT ACGAGATGAT GCGCCAGGCT
GGGGTGCTGG CCGCGGGTGG CACCGTGACG CAGGAGACCC GCCACTTCCA GGAGGCCGAC
GGCACCACGT CGCCCGGGCG CCCCAAGGAG ACCGCGGAGG ACTACCGCTA CTTCCCCGAA
CCGGACCTGG TGCCCGTCGC GCCGTCGCGG GAGTGGGTGG AGGAGCTGCG CAAGACGTTG
CCCGAACTGC CGTGGGAGCG TCGTAAGCGC ATCCAGCAGG AGTGGAACCT CACCGACGAG
GAACTGCGGG ACCTGTTCAA CACGGGTGCC GTCGACCTCG TGGCGGCGAC GGTGGAGGCC
GGTGCCAAGC CGGGCGAGGC GCGCAGCTGG TGGGTGCAGT ACCTGACCCA GCAGGCCAAC
GCCCGGGGGG TGGAGCTCAG CGAACTGCCG ATCACCCCGG CCCAGGTGGC GCGTGTGATC
GAACTCGTCA ACTCCGGTGA GCTGACGAAC AAGCTCGCGC GCGAAGTGGT CCAAGGCGTG
TTGGCCGGTG AGGGCGAACC CGACGAGGTC GTGGAGCAGC GCGGTCTCAA GGTGGTCTCC
GACGACTCGG CCCTGATCGC CGCCGTCGAC GAGGCCCTCG CCGCACAGCC GGACGTGGCC
GACAAGATCC GCGGCGGCAA GGTGCAGGCC GCAGGTGCCA TCGTCGGTGC GGTGATGAAG
GCGACCAAGG GACAGGCCGA CGCCAAGCGC GTGCGGGAGC TGGTCCTGGA AAGGGTCGGC
GCCTGA
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| Protein sequence | MTTVADLMDY DEVVEKYDPV LGLEVHVELN TKTKMFCGCP NEFGGEPNTH VCPTCLGLPG
GLPVVNGKAV ESAIRIGLAL NCEIAEWCRF ARKNYFYPDM PKNFQTSQHD EPIAFNGYLD
VVLDDGEVVR VGIERAHMEE DTGKSLHVGG TAGRIHGAEH SLLDYNRAGV PLIEIVTKPI
EGVGERAPEV ARAYVTALRD LLRAMDVSDV RMDQGSLRCD ANVSLRPKGS TEFGTRTETK
NVNSLRSVER AVRYEMMRQA GVLAAGGTVT QETRHFQEAD GTTSPGRPKE TAEDYRYFPE
PDLVPVAPSR EWVEELRKTL PELPWERRKR IQQEWNLTDE ELRDLFNTGA VDLVAATVEA
GAKPGEARSW WVQYLTQQAN ARGVELSELP ITPAQVARVI ELVNSGELTN KLAREVVQGV
LAGEGEPDEV VEQRGLKVVS DDSALIAAVD EALAAQPDVA DKIRGGKVQA AGAIVGAVMK
ATKGQADAKR VRELVLERVG A
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