Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_08660 |
Symbol | |
ID | 8386203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 888370 |
End bp | 889212 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974957 |
Product | predicted amidohydrolase |
Protein accession | YP_003132753 |
Protein GI | 257054921 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.68483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTGG CGCTGGCACA GACCGACTGT CGGCTTGGTG ACGTGGAAGG CAATCTGGCC GATGCCGAGC GCATCATCAA GCAAGCGGCC GAACGGGAGG CCGACCTGGT CGTGTTCCCG GAGTTGAGTC TCACGGGCTA CGCGCTGGGC CGACTCACCG ACAATGTCTC CGACATCTCG CTGTGGCCGG ACGATCCGCG CCTCGCCGCC TTGTCCCGGC ATGGGCCGGA TGTCGTGATC GGGCTGTTGG AGGACGGCCG TATCCGCAGG CACAACTCGG CCCTGTACCT GTCCAACGGC GCTCTCGTGC ACAACCATCG CAAGCTGTAC CTGCCGAACT ACCTGATCTG GGAGGAGCGC AAGCACGCCA GTCCCGGGCA GCACATGCGG GCCTTCGATA CCCGGCACGG CAGGTTCGCC ACGTTGGTCT GCAACGACGC TTGGCAGCCG ATGTTGCCGT GGCTGGCCGC GCAGGACGGT GCGGAACTGC TCATCGTCCC CGCCAACAGT GCGGCGAAAC CGACGGGCGG CTCGTTCGAC CCGGCCGAGT ACTGGCACGA CCTGCTCACG TTCACCGCGC GCATGCAGCA GTGCTGGGTG GTGTTCGTCA ACAGGGTGGG CGACGAGGCC GGGGTGCGTT TCTGGGGCGG TTCGCGGGTG CTCGACCCCT GGGGATCCGT GGTCACCGCC GCGCCCGACT GGGAGGAATC GCTCACGGTG GTCGACATAG ACCTCCGCGC GGTACGCAAG CGGCGTCATG AGATCCCGCT GCTGGCGGAC GCGCGCATGG GCCTGCTGCG CCGCGAGCTG GAGCGACTGA TCACGGAAAG TGGTGGTGAC TGA
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Protein sequence | MRVALAQTDC RLGDVEGNLA DAERIIKQAA EREADLVVFP ELSLTGYALG RLTDNVSDIS LWPDDPRLAA LSRHGPDVVI GLLEDGRIRR HNSALYLSNG ALVHNHRKLY LPNYLIWEER KHASPGQHMR AFDTRHGRFA TLVCNDAWQP MLPWLAAQDG AELLIVPANS AAKPTGGSFD PAEYWHDLLT FTARMQQCWV VFVNRVGDEA GVRFWGGSRV LDPWGSVVTA APDWEESLTV VDIDLRAVRK RRHEIPLLAD ARMGLLRREL ERLITESGGD
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