Gene Svir_08660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08660 
Symbol 
ID8386203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp888370 
End bp889212 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID644974957 
Productpredicted amidohydrolase 
Protein accessionYP_003132753 
Protein GI257054921 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.68483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGG CGCTGGCACA GACCGACTGT CGGCTTGGTG ACGTGGAAGG CAATCTGGCC 
GATGCCGAGC GCATCATCAA GCAAGCGGCC GAACGGGAGG CCGACCTGGT CGTGTTCCCG
GAGTTGAGTC TCACGGGCTA CGCGCTGGGC CGACTCACCG ACAATGTCTC CGACATCTCG
CTGTGGCCGG ACGATCCGCG CCTCGCCGCC TTGTCCCGGC ATGGGCCGGA TGTCGTGATC
GGGCTGTTGG AGGACGGCCG TATCCGCAGG CACAACTCGG CCCTGTACCT GTCCAACGGC
GCTCTCGTGC ACAACCATCG CAAGCTGTAC CTGCCGAACT ACCTGATCTG GGAGGAGCGC
AAGCACGCCA GTCCCGGGCA GCACATGCGG GCCTTCGATA CCCGGCACGG CAGGTTCGCC
ACGTTGGTCT GCAACGACGC TTGGCAGCCG ATGTTGCCGT GGCTGGCCGC GCAGGACGGT
GCGGAACTGC TCATCGTCCC CGCCAACAGT GCGGCGAAAC CGACGGGCGG CTCGTTCGAC
CCGGCCGAGT ACTGGCACGA CCTGCTCACG TTCACCGCGC GCATGCAGCA GTGCTGGGTG
GTGTTCGTCA ACAGGGTGGG CGACGAGGCC GGGGTGCGTT TCTGGGGCGG TTCGCGGGTG
CTCGACCCCT GGGGATCCGT GGTCACCGCC GCGCCCGACT GGGAGGAATC GCTCACGGTG
GTCGACATAG ACCTCCGCGC GGTACGCAAG CGGCGTCATG AGATCCCGCT GCTGGCGGAC
GCGCGCATGG GCCTGCTGCG CCGCGAGCTG GAGCGACTGA TCACGGAAAG TGGTGGTGAC
TGA
 
Protein sequence
MRVALAQTDC RLGDVEGNLA DAERIIKQAA EREADLVVFP ELSLTGYALG RLTDNVSDIS 
LWPDDPRLAA LSRHGPDVVI GLLEDGRIRR HNSALYLSNG ALVHNHRKLY LPNYLIWEER
KHASPGQHMR AFDTRHGRFA TLVCNDAWQP MLPWLAAQDG AELLIVPANS AAKPTGGSFD
PAEYWHDLLT FTARMQQCWV VFVNRVGDEA GVRFWGGSRV LDPWGSVVTA APDWEESLTV
VDIDLRAVRK RRHEIPLLAD ARMGLLRREL ERLITESGGD